ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4852

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4852_1
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

3..512
DNA (510bp) protein (170aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036F88DE
Indigoidine synthase A like protein
SCN18_30_10_14_R2_B_scaffold_4852_2
unknown

Not on your lists

comp(487..600)
DNA (114bp) protein (38aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4852_3
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(615..1139)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q24CI4_TETTS
Uncharacterized protein {ECO:0000313|EMBL:EWS71527.1}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
collagen and fibronectin-binding collagen-like cell surface-anchored protein FneE
SCN18_30_10_14_R2_B_scaffold_4852_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1228..2109)
DNA (882bp) protein (294aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50F8
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:AGA27093.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4852_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2232..4904
DNA (2673bp) protein (891aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E82B9F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26110.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4852_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5092..6474
DNA (1383bp) protein (461aa)
sulfatase n=1 Tax=Zavarzinella formosa RepID=UPI00037F67CC
Putative uncharacterized protein {ECO:0000313|EMBL:ADI22901.1}; TaxID=723627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium; environmental samples.;" source="uncultured Rhizobium sp. HF0500_35F13.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4852_7
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6471..7316
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031F844E
Uncharacterized protein {ECO:0000313|EMBL:EDL59971.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
succinylglutamate desuccinylase/aspartoacylase
Displaying 7 items

View Taxonomy