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SCN18_30_10_14_R2_B_scaffold_2097

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2097_1
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..532)
DNA (531bp) protein (177aa)
Membrane protein, putative n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDD6_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AKH42521.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2097_2
unknown

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615..1160
DNA (546bp) protein (182aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2097_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1529..2746
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A6D
Serine/threonine protein kinase related protein-like {ECO:0000313|EMBL:EAQ82341.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
pyrrolo-quinoline quinone
SCN18_30_10_14_R2_B_scaffold_2097_4
SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, Bacteroidetes, Bacteria

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2750..3595
DNA (846bp) protein (282aa)
Ser/Thr protein phosphatase family protein, putative n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A4E
Phosphoesterase {ECO:0000313|EMBL:KFC19734.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
phosphoesterase
SCN18_30_10_14_R2_B_scaffold_2097_5
unknown

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3822..4214
DNA (393bp) protein (131aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2097_6
unknown

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comp(4236..4523)
DNA (288bp) protein (96aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2097_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4774..5346)
DNA (573bp) protein (191aa)
Regulatory protein TetR n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNQ0_BRESC
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADL02285.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCN18_30_10_14_R2_B_scaffold_2097_8
SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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5517..6263
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas sp. CFII64 RepID=S6H2M4_9PSED
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EPJ80089.1}; TaxID=911242 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII64.;"
short-chain dehydrogenase/reductase SDR
SCN18_30_10_14_R2_B_scaffold_2097_9
unknown

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6825..7511
DNA (687bp) protein (229aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2097_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7689..7931
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56F6
dpbF; DNA polymerase domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
SCN18_30_10_14_R2_B_scaffold_2097_11
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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8048..9541
DNA (1494bp) protein (498aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
FAD-dependent oxidoreductase n=1 Tax=Schlesneria paludicola RepID=UPI00029A88A3
glycerol-3-phosphate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_2097_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9700..11130
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C392A
SCN18_30_10_14_R2_B_scaffold_2097_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11300..12247
DNA (948bp) protein (316aa)
membrane protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C40A9
NAD-dependent epimerase/dehydratase
Tax=GWC2_Geobacteraceae_55_20_curated
SCN18_30_10_14_R2_B_scaffold_2097_14
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12231..13403)
DNA (1173bp) protein (391aa)
glycosyl transferase family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42F9
Succinoglycan biosynthesis protein ExoO {ECO:0000313|EMBL:JAC75888.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetraselmis sp. GSL018.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2097_15
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13493..14611)
DNA (1119bp) protein (373aa)
UDP-galactopyranose mutase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42F8
Strain LMCA8 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36361.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas viridiflava.;"
glf; udp-galactopyranose mutase
Displaying 15 items

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