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SCN18_30_10_14_R2_B_scaffold_2292

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2292_1
Thermocrinis ruber, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
flagellar basal-body rod protein FlgG n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A53
flgG; flagellar basal body rod protein FlgG
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:AHE95368.1}; TaxID=932678 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Thermocrinis.;" source="Thermocrinis ruber DSM 12173.;"
SCN18_30_10_14_R2_B_scaffold_2292_2
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(398..3622)
DNA (3225bp) protein (1075aa)
MdsD protein, putative n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50BE
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ACY49189.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
SCN18_30_10_14_R2_B_scaffold_2292_3
scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, Eukaryote

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3878..5389
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I8T6_MYCRH
Uncharacterized protein {ECO:0000313|EMBL:EID55170.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
Hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2292_4
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5482..6717
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2K2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19442.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2292_5
unknown

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comp(6748..7266)
DNA (519bp) protein (173aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2292_6
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7365..8294
DNA (930bp) protein (310aa)
ADP-ribosylglycohydrolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5211
ADP-ribosylation/Crystallin J1
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:ADC61935.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
SCN18_30_10_14_R2_B_scaffold_2292_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(8485..9315)
DNA (831bp) protein (277aa)
tryptophan synthase alpha chain, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5413
tryptophan synthase subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
SCN18_30_10_14_R2_B_scaffold_2292_8
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9312..9761)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58C7
Membrane protein {ECO:0000313|EMBL:KJK18366.1}; TaxID=1619950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2(2015).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2292_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9970..12765
DNA (2796bp) protein (932aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D250_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19290.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2292_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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12923..14317
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJK9_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29030.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2292_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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14565..16451
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F71
redoxin
Redoxin domain protein {ECO:0000313|EMBL:ADY61371.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_2292_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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16593..17441
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D39
SCN18_30_10_14_R2_B_scaffold_2292_13
unknown

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17513..17911
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C508F
SCN18_30_10_14_R2_B_scaffold_2292_14
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(17918..18319)
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
twitching motility protein PilT n=1 Tax=Scytonema hofmanni RepID=UPI0003457556
PilT domain-containing protein
SCN18_30_10_14_R2_B_scaffold_2292_15
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(18316..18570)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002FD7922
Uncharacterized protein {ECO:0000313|EMBL:KIJ77889.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2292_16
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18708..19568
DNA (861bp) protein (287aa)
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase (EC:2.6.1.-)
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase {ECO:0000313|EMBL:CCG08713.1}; EC=2.6.1.- {ECO:0000313|EMBL:CCG08713.1};; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
branched-chain amino acid aminotransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C36B8
SCN18_30_10_14_R2_B_scaffold_2292_17
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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19693..20508
DNA (816bp) protein (272aa)
sugar phosphate isomerase/epimerase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5030
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGA27094.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2292_18
unknown

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comp(20529..20876)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031BF83A
SCN18_30_10_14_R2_B_scaffold_2292_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(20926..22527)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000317951E
peptidase domain-containing protein
Probable serine proteinase, subtilase family protein {ECO:0000313|EMBL:EAQ80347.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
SCN18_30_10_14_R2_B_scaffold_2292_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(22524..22982)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000317951E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 20 items

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