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SCN18_30_10_14_R2_B_scaffold_2971

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2971_1
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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comp(2..370)
DNA (369bp) protein (123aa)
peptidase M42 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5125
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ADB17922.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2971_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(453..2060)
DNA (1608bp) protein (536aa)
purine biosynthesis protein purH n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5100
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
SCN18_30_10_14_R2_B_scaffold_2971_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2093..3064)
DNA (972bp) protein (324aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000368DA54
ATPase of the PP-loop superfamily implicated in cell cycle control
SCN18_30_10_14_R2_B_scaffold_2971_4
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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3166..3684
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50FD
Putative transmembrane protein {ECO:0000313|EMBL:AKF07920.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2971_5
unknown

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3784..4476
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EEA
SCN18_30_10_14_R2_B_scaffold_2971_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4549..5418
DNA (870bp) protein (290aa)
branched-chain amino acid aminotransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58CC
branched-chain amino acid aminotransferase
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_2971_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5415..5867
DNA (453bp) protein (151aa)
universal stress protein UspA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57E9
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADG68181.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2971_8
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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5998..6867
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A0F
hypothetical protein
TIGR00268 family protein {ECO:0000313|EMBL:AGA24704.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2971_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6864..7124
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A0E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26116.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2971_10
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7236..8285)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4CC8
Putative uncharacterized protein {ECO:0000313|EMBL:EEC73709.1}; TaxID=39946 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza sativa subsp. indica (Rice).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2971_11
scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, Eukaryote

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comp(8517..9338)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35D0
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ADG65888.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2971_12
unknown

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comp(9437..9613)
DNA (177bp) protein (59aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2971_13
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9743..10861)
DNA (1119bp) protein (373aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3537
Transposase {ECO:0000313|EMBL:CCF85964.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
transposase
Displaying 13 items

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