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SCN18_30_10_14_R2_B_scaffold_993

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_993_1
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

2..187
DNA (186bp) protein (62aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Thermincola potens (strain JR) RepID=D5XB30_THEPJ
cytochrome c biogenesis protein transmembrane region
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
SCN18_30_10_14_R2_B_scaffold_993_2
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

211..2706
DNA (2496bp) protein (832aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AFL85370.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCN18_30_10_14_R2_B_scaffold_993_3
unknown

Not on your lists

2798..3061
DNA (264bp) protein (88aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_4
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(3131..4117)
DNA (987bp) protein (329aa)
Site-specific recombinase XerD n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQH8_SINAD
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGA31704.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_993_5
scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, Plasmid-like

Not on your lists

4334..4651
DNA (318bp) protein (106aa)
Transcriptional regulator, AbrB family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHH7_KORVE
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ABF43673.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCN18_30_10_14_R2_B_scaffold_993_6
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

Not on your lists

4611..5027
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003479946
Twitching motility protein PilT {ECO:0000313|EMBL:KIJ77733.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
PilT protein domain protein
SCN18_30_10_14_R2_B_scaffold_993_7
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

5169..5570
DNA (402bp) protein (134aa)
ArsR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41F7
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGG81903.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Transcriptional repressor smtB
SCN18_30_10_14_R2_B_scaffold_993_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5574..6548
DNA (975bp) protein (325aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZAY5_TERRK
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFL86403.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCN18_30_10_14_R2_B_scaffold_993_9
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6566..7240
DNA (675bp) protein (225aa)
MIP family channel protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ24_9BACT
MIP family channel protein {ECO:0000313|EMBL:EDY20715.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_993_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

7237..7638
DNA (402bp) protein (134aa)
protein tyrosine phosphatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51E5
Protein tyrosine phosphatase {ECO:0000313|EMBL:KER09653.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
protein-tyrosine phosphatase
SCN18_30_10_14_R2_B_scaffold_993_11
unknown

Not on your lists

7733..7981
DNA (249bp) protein (83aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_12
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7962..8420)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFR1_9ARCH
hypothetical protein
Tax=CG_Arma_01
SCN18_30_10_14_R2_B_scaffold_993_13
unknown

Not on your lists

comp(8421..8723)
DNA (303bp) protein (101aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_14
unknown

Not on your lists

8906..10051
DNA (1146bp) protein (382aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_15
unknown

Not on your lists

comp(10066..10482)
DNA (417bp) protein (139aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_16
unknown

Not on your lists

comp(10520..11020)
DNA (501bp) protein (167aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_17
unknown

Not on your lists

11137..11550
DNA (414bp) protein (138aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_18
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

11554..14214
DNA (2661bp) protein (887aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036631C7
conjugative relaxase domain-containing protein
Conjugative relaxase domain protein {ECO:0000313|EMBL:AEJ38622.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
SCN18_30_10_14_R2_B_scaffold_993_19
unknown

Not on your lists

14225..14890
DNA (666bp) protein (222aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_20
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

14853..16454
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H9G2_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI18686.1}; TaxID=1160283 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
Type IV secretion system, TraD, DNA-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_993_21
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16721..17674)
DNA (954bp) protein (318aa)
ParB-like partition protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRM7_SINAD
ParB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGA31650.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_993_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17674..18609)
DNA (936bp) protein (312aa)
ATPase involved in chromosome partitioning n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRH9_SINAD
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGA31605.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_993_23
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19510..20955
DNA (1446bp) protein (482aa)
Replication initiator protein A n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRJ9_SINAD
replication initiator protein A
Replication initiator protein A {ECO:0000313|EMBL:AGA31607.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_993_24
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22479..23243
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AGS4_9PLAN
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_993_25
unknown

Not on your lists

comp(23262..23528)
DNA (267bp) protein (89aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_993_26
SCNPILOT_CONT_300_BF_Nitrosospira_plasmid_56_185, SCNPILOT_CONT_300_BF_Nitrosospira_plasmid_56_185, SCNPILOT_CONT_300_BF_Nitrosospira_plasmid_56_185, SCNPILOT_CONT_300_BF_Nitrosospira_plasmid_56_185, SCNPILOT_CONT_300_BF_Nitrosospira_plasmid_56_185, Plasmid-like

Not on your lists

23901..24377
DNA (477bp) protein (159aa)
Transcriptional regulator, MerR family id=3552008 bin=GWC2_Proteo_65_14_Ab886 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
MerR family transcriptional regulator
Tax=GWC2_Deltaproteobacteria_65_14_curated
SCN18_30_10_14_R2_B_scaffold_993_27
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24494..25603
DNA (1110bp) protein (370aa)
Biotin/lipoyl attachment:Secretion protein HlyD n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGT9_9BACT
Biotin/lipoyl attachment:Secretion protein HlyD
Biotin/lipoyl attachment:Secretion protein HlyD {ECO:0000313|EMBL:CBE68970.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
SCN18_30_10_14_R2_B_scaffold_993_28
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25617..26906
DNA (1290bp) protein (430aa)
ABC transporter, membrane protein, putative n=2 Tax=Geobacter sulfurreducens RepID=D7AH93_GEOSK
ABC transporter membrane protein
ABC transporter permease {ECO:0000313|EMBL:AJY70687.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
SCN18_30_10_14_R2_B_scaffold_993_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26920..27654
DNA (735bp) protein (245aa)
Peptide ABC transporter ATPase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFZ3_9PROT
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EME71773.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
peptide ABC transporter ATPase
SCN18_30_10_14_R2_B_scaffold_993_30
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

27681..28205
DNA (525bp) protein (175aa)
Nucleic acid binding OB-fold tRNA/helicase-type id=3232643 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=GWC2_Nitrospirae_42_7_curated
Displaying items 1-30 of 31 in total

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