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SCN18_30_10_14_R2_B_scaffold_1075

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1075_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
SCN18_30_10_14_R2_B_scaffold_1075_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

578..841
DNA (264bp) protein (88aa)
SCN18_30_10_14_R2_B_scaffold_1075_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

841..3651
DNA (2811bp) protein (937aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BBC
Marine sediment metagenome DNA, contig: S01H1_S03621 {ECO:0000313|EMBL:GAF93987.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1075_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3668..4564
DNA (897bp) protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN98864.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_1075_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4657..5118
DNA (462bp) protein (154aa)
SCN18_30_10_14_R2_B_scaffold_1075_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5177..5425)
DNA (249bp) protein (83aa)
SCN18_30_10_14_R2_B_scaffold_1075_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5678..6409
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036A2BCA
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACK50959.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_30_10_14_R2_B_scaffold_1075_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6460..6741)
DNA (282bp) protein (94aa)
SCN18_30_10_14_R2_B_scaffold_1075_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6872..7234
DNA (363bp) protein (121aa)
SCN18_30_10_14_R2_B_scaffold_1075_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7411..7704)
DNA (294bp) protein (98aa)
SCN18_30_10_14_R2_B_scaffold_1075_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7916..8488
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484EE8
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1075_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8501..8779
DNA (279bp) protein (93aa)
SCN18_30_10_14_R2_B_scaffold_1075_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8935..9153
DNA (219bp) protein (73aa)
SCN18_30_10_14_R2_B_scaffold_1075_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9230..9940)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SH28 RepID=K5CD62_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:EKK01550.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1075_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10140..10649
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI00036C059C
Bacteriophage T7-related protein {ECO:0000313|EMBL:AHZ45653.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NUMOD4 motif
SCN18_30_10_14_R2_B_scaffold_1075_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10758..11063
DNA (306bp) protein (102aa)
SCN18_30_10_14_R2_B_scaffold_1075_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11060..11692
DNA (633bp) protein (211aa)
SCN18_30_10_14_R2_B_scaffold_1075_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11877..12068)
DNA (192bp) protein (64aa)
SCN18_30_10_14_R2_B_scaffold_1075_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12307..12951)
DNA (645bp) protein (215aa)
SCN18_30_10_14_R2_B_scaffold_1075_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12948..13562)
DNA (615bp) protein (205aa)
SCN18_30_10_14_R2_B_scaffold_1075_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13648..15270)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B43
Bifunctional DNA Primase/polymerase
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
SCN18_30_10_14_R2_B_scaffold_1075_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15267..16451)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B43
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48211.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1075_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16524..16829)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C560E
SCN18_30_10_14_R2_B_scaffold_1075_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16909..17784)
DNA (876bp) protein (292aa)
SCN18_30_10_14_R2_B_scaffold_1075_25
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18452..19348
DNA (897bp) protein (299aa)
SCN18_30_10_14_R2_B_scaffold_1075_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19638..19757
DNA (120bp) protein (40aa)
SCN18_30_10_14_R2_B_scaffold_1075_27
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19898..20113)
DNA (216bp) protein (72aa)
Integron integrase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ7_9PLAN
Integron integrase {ECO:0000313|EMBL:EAQ82326.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
putative transposase
SCN18_30_10_14_R2_B_scaffold_1075_28
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20233..21387)
DNA (1155bp) protein (385aa)
SCN18_30_10_14_R2_B_scaffold_1075_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22244..22825)
DNA (582bp) protein (194aa)
Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADU3_CARHZ
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABB16137.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
SCN18_30_10_14_R2_B_scaffold_1075_30
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22919..23455)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5682
Displaying items 1-30 of 34 in total

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