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SCN18_30_10_14_R2_B_scaffold_1089

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1089_1
unknown

Not on your lists

905..1171
DNA (267bp) protein (89aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1089_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists


1232..1510
DNA (279bp) protein (93aa)
30S ribosomal protein S23 id=14425781 bin=bin1_lowGC species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
S23 ribosomal protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SCN18_30_10_14_R2_B_scaffold_1089_3
unknown

Not on your lists

1699..2124
DNA (426bp) protein (142aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1089_4
unknown

Not on your lists

2137..2520
DNA (384bp) protein (128aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1089_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2492..3442)
DNA (951bp) protein (317aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK95532.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA methylase N-4/N-6 domain-containing protein
DNA modification methylase id=2195643 bin=GWB2_Geobacter-like_52_12 species=Ruminococcus sp. SR1/5 genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
SCN18_30_10_14_R2_B_scaffold_1089_6
unknown

Not on your lists

3691..3894
DNA (204bp) protein (68aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1089_7
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3898..5634)
DNA (1737bp) protein (579aa)
Resolvase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5UBJ2_9PLAN
Resolvase {ECO:0000313|EMBL:EMI55206.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
recombinase
SCN18_30_10_14_R2_B_scaffold_1089_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5715..6614
DNA (900bp) protein (300aa)
peptidase M20 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BC6
Peptidase M20 {ECO:0000313|EMBL:KFA90129.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
amidohydrolase
SCN18_30_10_14_R2_B_scaffold_1089_9
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

6789..9161
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00037A345F
Uncharacterized protein {ECO:0000313|EMBL:EDY21681.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
signal peptide
SCN18_30_10_14_R2_B_scaffold_1089_10
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

9259..10506
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031EB2C7
Uncharacterized protein {ECO:0000313|EMBL:EDY21680.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1089_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10779..12335
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCD7_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27044.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1089_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12399..13976
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036E57C6
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADV61765.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1089_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14130..14672
DNA (543bp) protein (181aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5A1B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18463.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1089_14
unknown

Not on your lists

14745..15497
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E090C5
SCN18_30_10_14_R2_B_scaffold_1089_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15556..17901
DNA (2346bp) protein (782aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FD0
Uncharacterized protein {ECO:0000313|EMBL:ETW97711.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCN18_30_10_14_R2_B_scaffold_1089_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18013..19380
DNA (1368bp) protein (456aa)
FolC bifunctional protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FCF
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_1089_17
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19484..21268
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FCE
Uncharacterized protein {ECO:0000313|EMBL:EAQ80467.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1089_18
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21350..23620
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV63422.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1089_19
unknown

Not on your lists

23642..24004
DNA (363bp) protein (121aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1089_20
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24093..25466)
DNA (1374bp) protein (458aa)
YcjX-like protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DC4
Contig_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIX13968.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
SCN18_30_10_14_R2_B_scaffold_1089_21
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

25589..26800
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D39D43
dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:AGA25795.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 21 items

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