ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1196

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1196_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..1091)
DNA (1089bp) protein (363aa)
oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C576A
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA27130.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1196_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1248..2372
DNA (1125bp) protein (375aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
gamma-glutamyl kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BF3
glutamate 5-kinase
SCN18_30_10_14_R2_B_scaffold_1196_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2414..3142)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E3F
hypothetical protein
Tax=CG_Arma_02
SCN18_30_10_14_R2_B_scaffold_1196_4
unknown

Not on your lists

3312..4574
DNA (1263bp) protein (421aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1196_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4582..5127)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95873.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_1196_6
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5372..7525)
DNA (2154bp) protein (718aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:ADY58077.1}; EC=3.4.21.26 {ECO:0000313|EMBL:ADY58077.1};; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
prolyl endopeptidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BAF
SCN18_30_10_14_R2_B_scaffold_1196_7
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7703..10276)
DNA (2574bp) protein (858aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM71_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72505.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1196_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10351..11625)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000377E084
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87081.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_1196_9
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11789..12661)
DNA (873bp) protein (291aa)
id=4647998 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
SCN18_30_10_14_R2_B_scaffold_1196_10
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12809..14338)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E4A91C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28014.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1196_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14565..15392
DNA (828bp) protein (276aa)
probable tolQ protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5017
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ADG69619.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_1196_12
unknown

Not on your lists

15494..15985
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5016
biopolymer transport protein
SCN18_30_10_14_R2_B_scaffold_1196_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16105..16596
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5015
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADV63189.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1196_14
unknown

Not on your lists

16928..18460
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5014
SCN18_30_10_14_R2_B_scaffold_1196_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18500..20203
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5013
Uncharacterized protein {ECO:0000313|EMBL:EMI25057.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1196_16
unknown

Not on your lists

comp(20492..20788)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F4FB66
SCN18_30_10_14_R2_B_scaffold_1196_17
unknown

Not on your lists

comp(20834..21142)
DNA (309bp) protein (103aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1196_18
unknown

Not on your lists

comp(21261..21362)
DNA (102bp) protein (34aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1196_19
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21578..22822
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4931
Magnetosome protein MamE (Trypsin-like serine protease) {ECO:0000313|EMBL:CAX84228.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine protease
SCN18_30_10_14_R2_B_scaffold_1196_20
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22946..23887
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5242
Uncharacterized protein {ECO:0000313|EMBL:EGW45512.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
HflK protein
Displaying 20 items

View Taxonomy