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SCN18_30_10_14_R2_B_scaffold_1204

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1204_1
unknown

Not on your lists

1..1668
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38E3
SCN18_30_10_14_R2_B_scaffold_1204_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1937..2308
DNA (372bp) protein (124aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F67
Marine sediment metagenome DNA, contig: S01H1_S39317 {ECO:0000313|EMBL:GAG45520.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xylose isomerase domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1204_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2260..2805
DNA (546bp) protein (182aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F67
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABJ84681.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_1204_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2952..3695)
DNA (744bp) protein (248aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
YacM n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45CE
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCN18_30_10_14_R2_B_scaffold_1204_5
unknown

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comp(3710..4021)
DNA (312bp) protein (104aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1204_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4236..4997
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57BA
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGA31370.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1204_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5003..7519)
DNA (2517bp) protein (839aa)
probable protein kinase yloP-putative serine/threonine protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4245
Putative serine/threonine protein kinase {ECO:0000313|EMBL:AAX07536.1}; Flags: Fragment;; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
serine/threonine protein kinase-related protein
SCN18_30_10_14_R2_B_scaffold_1204_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7732..9648)
DNA (1917bp) protein (639aa)
probable protein kinase yloP-putative serine/threonine protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4244
Putative serine/threonine protein kinase {ECO:0000313|EMBL:AAX07536.1}; Flags: Fragment;; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
serine/threonine protein kinase-related protein
SCN18_30_10_14_R2_B_scaffold_1204_9
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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9906..12035
DNA (2130bp) protein (710aa)
nitrate reductase (EC:1.7.99.4)
Nitrate reductase {ECO:0000313|EMBL:ADV60870.1}; EC=1.7.99.4 {ECO:0000313|EMBL:ADV60870.1};; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
molybdopterin oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4243
SCN18_30_10_14_R2_B_scaffold_1204_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12050..12427)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C423F
Uncharacterized protein {ECO:0000313|EMBL:ETW98296.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCN18_30_10_14_R2_B_scaffold_1204_11
unknown

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comp(12402..12713)
DNA (312bp) protein (104aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1204_12
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12978..13946
DNA (969bp) protein (323aa)
Methyltransferase type 12 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4581
Uncharacterized protein {ECO:0000313|EMBL:KKL23932.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
methyltransferase type 12
SCN18_30_10_14_R2_B_scaffold_1204_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14195..15496
DNA (1302bp) protein (434aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
adenylosuccinate synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A01
adenylosuccinate synthase
SCN18_30_10_14_R2_B_scaffold_1204_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15607..16371
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
UDP pyrophosphate synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A00
SCN18_30_10_14_R2_B_scaffold_1204_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16371..17234
DNA (864bp) protein (288aa)
CDP-diglyceride synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49FF
CDP-diglyceride synthetase
CDP-diglyceride synthetase {ECO:0000313|EMBL:AGA30870.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1204_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17240..18205
DNA (966bp) protein (322aa)
phosphate starvation protein PhoH n=1 Tax=Zavarzinella formosa RepID=UPI0003129090
phosphate starvation-inducible protein PhoH
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:AGA30875.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1204_17
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18379..18855)
DNA (477bp) protein (159aa)
beta-Ig-H3/fasciclin n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54B0
secreted and surface protein containing fasciclin-like repeats
Secreted and surface protein containing fasciclin-like repeats {ECO:0000313|EMBL:BAQ17940.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCN18_30_10_14_R2_B_scaffold_1204_18
SCNpilot_P_inoc_Paludibacter_47_17, SCNpilot_P_inoc_Paludibacter_47_17, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18990..19805)
DNA (816bp) protein (272aa)
RNA pseudouridylate synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4782
RluA family pseudouridine synthase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
SCN18_30_10_14_R2_B_scaffold_1204_19
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19889..21694)
DNA (1806bp) protein (602aa)
ABC transporter ATPase (EC:3.6.3.-)
ABC-type transport system, ATPase component {ECO:0000313|EMBL:CBK43687.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK43687.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ABC transporter ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47A7
SCN18_30_10_14_R2_B_scaffold_1204_20
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21850..23436
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5516
Uncharacterized protein {ECO:0000313|EMBL:EDL57270.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1204_21
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23452..24732
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C575D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24503.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1204_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24741..25847
DNA (1107bp) protein (369aa)
WD-repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C575F
WD-40 repeat-containing protein
WD-40 repeat protein {ECO:0000313|EMBL:ADB15912.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Displaying 22 items

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