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SCN18_30_10_14_R2_B_scaffold_1272

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1272_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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222..1484
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C453C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP12069.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCN18_30_10_14_R2_B_scaffold_1272_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1481..2428
DNA (948bp) protein (316aa)
methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C453B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69783.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_30_10_14_R2_B_scaffold_1272_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2540..3277
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4539
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFA90960.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
opuCA; ABC transporter ATP-binding protein
SCN18_30_10_14_R2_B_scaffold_1272_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3274..4782
DNA (1509bp) protein (503aa)
amino acid ABC transporter permease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4538
glycine betaine/L-proline ABC transporter permease and substrate-binding protein
Glycine betaine/L-proline ABC transporter permease and substrate-binding protein {ECO:0000313|EMBL:AEI63090.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_30_10_14_R2_B_scaffold_1272_5
SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(4789..6426)
DNA (1638bp) protein (546aa)
trxB; thioredoxin reductase (EC:1.8.1.9)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000312E1D8
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EMI27518.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
SCN18_30_10_14_R2_B_scaffold_1272_6
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(6801..7595)
DNA (795bp) protein (265aa)
Putative membrane protein/domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF57_CHLTF
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_S11843 {ECO:0000313|EMBL:GAI40108.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_1272_7
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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7647..8633
DNA (987bp) protein (329aa)
Putative chromate reductase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S97_SYMTH
chromate reductase
Putative chromate reductase {ECO:0000313|EMBL:BAD39446.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCN18_30_10_14_R2_B_scaffold_1272_8
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(8600..9922)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S96_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD39447.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCN18_30_10_14_R2_B_scaffold_1272_9
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

comp(9919..10875)
DNA (957bp) protein (319aa)
Methanol dehydrogenase regulatory protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S95_SYMTH
moxR3; methanol dehydrogenase regulatory protein
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:BAD39448.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCN18_30_10_14_R2_B_scaffold_1272_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(10853..12049)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036636C7
Uncharacterized protein {ECO:0000313|EMBL:EFG47239.1}; TaxID=585530 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium mcbrellneri ATCC 49030.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1272_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(12059..12661)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM37_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58592.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCN18_30_10_14_R2_B_scaffold_1272_12
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12658..13623)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037BF57A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ21122.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCN18_30_10_14_R2_B_scaffold_1272_13
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(14094..16064)
DNA (1971bp) protein (657aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036E6ED0
hypothetical protein
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_30_10_14_R2_B_scaffold_1272_14
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(16113..16694)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003455D50
Uncharacterized protein {ECO:0000313|EMBL:CDX54740.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1272_15
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(16691..17959)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037241E6
Uncharacterized protein {ECO:0000313|EMBL:CDX54742.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1272_16
unknown

Not on your lists

comp(18350..18604)
DNA (255bp) protein (85aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1272_17
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18928..20880
DNA (1953bp) protein (651aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AECFE
Uncharacterized protein {ECO:0000313|EMBL:EDM28693.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1272_18
unknown

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comp(20945..21178)
DNA (234bp) protein (78aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1272_19

Not on your lists

comp(21254..21652)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C464D
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49318.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_30_10_14_R2_B_scaffold_1272_20
scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, Plasmid-like

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comp(21956..22741)
DNA (786bp) protein (262aa)
Phage DNA methylase n=1 Tax=Streptococcus equi subsp. equi (strain 4047) RepID=C0MBJ3_STRE4
phage DNA methylase
Phage DNA methylase {ECO:0000313|EMBL:CAW92152.1}; TaxID=553482 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. equi (strain 4047).;"
Displaying 20 items

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