ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1429

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1429_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..794)
DNA (792bp) protein (264aa)
xylose isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5949
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGA28984.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1429_2
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

1331..2650
DNA (1320bp) protein (440aa)
probable NADH-dependent dyhydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5948
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:ADI22599.1}; TaxID=723598 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured verrucomicrobium HF0500_16O23.;"
dehydrogenase
SCN18_30_10_14_R2_B_scaffold_1429_3
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2773..4005
DNA (1233bp) protein (411aa)
cell surface protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42BA
SCN18_30_10_14_R2_B_scaffold_1429_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4029..4997)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C594A
Protein containing SMP-30/Gluconolaconase/LRE-like region domain protein {ECO:0000313|EMBL:EKJ98994.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1429_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5139..5939
DNA (801bp) protein (267aa)
short-chain dehydrogenase/reductase SDR n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C594B
Short-chain dehydrogenase {ECO:0000313|EMBL:KKB12140.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
short-chain dehydrogenase/reductase SDR
SCN18_30_10_14_R2_B_scaffold_1429_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6161..6547
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C367D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27348.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1429_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6650..7411
DNA (762bp) protein (254aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C476C
3-deoxy-D-manno-octulosonate cytidylyltransferase
SCN18_30_10_14_R2_B_scaffold_1429_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7523..9133
DNA (1611bp) protein (537aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
CTP synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4548
CTP synthase
SCN18_30_10_14_R2_B_scaffold_1429_9
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(9140..10342)
DNA (1203bp) protein (401aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmata sp. Wa1-1 RepID=Q5EUJ1_9PLAN
Putative serine/threonine protein kinase {ECO:0000313|EMBL:AAX07491.1}; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
serine/threonine protein kinase-related protein
SCN18_30_10_14_R2_B_scaffold_1429_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10572..11351)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A64
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26198.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1429_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11484..12269)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A64
Uncharacterized protein {ECO:0000313|EMBL:EAQ80218.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1429_12
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

comp(12453..13220)
DNA (768bp) protein (256aa)
histidinol-phosphate phosphatase, putative n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49DC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_30_10_14_R2_B_scaffold_1429_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13304..14263)
DNA (960bp) protein (320aa)
ROK family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49DD
transcriptional regulator/sugar kinase
Tax=RBG_16_Caldithrix_48_16_curated
SCN18_30_10_14_R2_B_scaffold_1429_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14342..15001)
DNA (660bp) protein (220aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
phosphoribosylanthranilate isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49DE
phosphoribosylanthranilate isomerase
SCN18_30_10_14_R2_B_scaffold_1429_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14983..15621)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49DF
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53811.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1429_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15643..16572)
DNA (930bp) protein (310aa)
glucose kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C29
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:AGA27218.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1429_17
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16666..19374)
DNA (2709bp) protein (903aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C2A
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:EEF58805.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoesterase family protein
SCN18_30_10_14_R2_B_scaffold_1429_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19489..19971
DNA (483bp) protein (161aa)
GNAT family acetyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A23
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGA29671.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1429_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20529..21104
DNA (576bp) protein (192aa)
chemotaxis protein CheY n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A22
excisionase family DNA-binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADV60866.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1429_20
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21269..22975
DNA (1707bp) protein (569aa)
FAD-dependent oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A20
NAD(FAD)-dependent dehydrogenase
Tax=CG_Arma_01
SCN18_30_10_14_R2_B_scaffold_1429_21
solids_Saccharomycetales_1, solids_Saccharomycetales_1, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

23125..24102
DNA (978bp) protein (326aa)
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCZ5_SINAD
aldo/keto reductase, diketogulonate reductase
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:AGA26740.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1429_22
unknown

Not on your lists

comp(24103..24342)
DNA (240bp) protein (80aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1429_23
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24434..25405)
DNA (972bp) protein (324aa)
Ankyrin repeat-like protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C473E
Probable squalene-hopene cyclase {ECO:0000313|EMBL:EDL57980.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
ankyrin repeat-containing protein
Displaying 23 items

View Taxonomy