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SCN18_30_10_14_R2_B_scaffold_1478

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1478_1
unknown

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1478_2
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

125..700
DNA (576bp) protein (192aa)
ABC transporter substrate-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DB4
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADB19189.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1478_3
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

768..1757
DNA (990bp) protein (330aa)
ABC transporter permease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DB5
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADB19190.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1478_4
SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1754..2869
DNA (1116bp) protein (372aa)
ABC transporter permease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DB6
inner-membrane translocator
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_1478_5
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2877..3914
DNA (1038bp) protein (346aa)
branched-chain amino acid transport ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DB7
ABC transporter
Tax=RBG_16_Planctomycetes_59_8_curated
SCN18_30_10_14_R2_B_scaffold_1478_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3914..4633
DNA (720bp) protein (240aa)
amino acid ABC transporter ATPase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DB8
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB19193.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1478_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4743..5840
DNA (1098bp) protein (366aa)
putative mandelate racemase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CDD
Putative mandelate racemase/muconate lactonizingprotein
Tax=BJP_IG2069_Desfulfarculales_53_13
SCN18_30_10_14_R2_B_scaffold_1478_trna_1
unknown

Not on your lists

5975..6047
DNA (73bp)
transferRNA Ala
SCN18_30_10_14_R2_B_scaffold_1478_8
unknown

Not on your lists

6187..6792
DNA (606bp) protein (202aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38E1
SCN18_30_10_14_R2_B_scaffold_1478_9
unknown

Not on your lists

7230..7598
DNA (369bp) protein (123aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1478_10
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

7650..10037
DNA (2388bp) protein (796aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003096156
phage tape measure protein
Phage tape measure protein {ECO:0000313|EMBL:ADG70070.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_1478_11
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10519..10854
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R1A0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB14885.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1478_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10932..11882
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F172B8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB14884.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1478_13
unknown

Not on your lists

11979..12575
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3C8C
SCN18_30_10_14_R2_B_scaffold_1478_14
SCNPILOT_EXPT_750_BF_Phage_67_27, SCNPILOT_EXPT_750_BF_Phage_67_27, SCNPILOT_EXPT_750_BF_Phage_67_27, SCNPILOT_EXPT_750_BF_Phage_67_27, SCNPILOT_EXPT_750_BF_Phage_67_27, Phage

Not on your lists

12753..14060
DNA (1308bp) protein (436aa)
Phage major capsid protein, HK97 family n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZE0_PLAL2
phage major capsid protein, HK97 family
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1478_15
unknown

Not on your lists

comp(14432..14692)
DNA (261bp) protein (87aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1478_16
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15113..15457
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003193D59
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49307.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1478_17
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15522..16922
DNA (1401bp) protein (467aa)
Pectic acid lyase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SPI9_PLABD
pectic acid lyase
Pectic acid lyase {ECO:0000313|EMBL:ADY57893.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1478_18
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17161..18024)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4D8F
type 12 methyltransferase
Methyltransferase domain protein {ECO:0000313|EMBL:EKK02889.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
SCN18_30_10_14_R2_B_scaffold_1478_19
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18124..18729)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A55
Methyltransferase domain protein {ECO:0000313|EMBL:KJW02405.1}; TaxID=1133329 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia.;" source="Rickettsia endosymbiont of Ixodes pacificus.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1478_20
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18928..20727
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B76
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA25937.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1478_21
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

20994..22934
DNA (1941bp) protein (647aa)
TrkA-N n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C48BF
trkA; TrkA family potassium channel protein
Potassium channel protein, TrkA family {ECO:0000313|EMBL:ACA99088.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
SCN18_30_10_14_R2_B_scaffold_1478_22
unknown

Not on your lists

22963..23526
DNA (564bp) protein (188aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1478_23
unknown

Not on your lists

23928..24734
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3789
SCN18_30_10_14_R2_B_scaffold_1478_24
R_Omnitrophica_50_24, Omnitrophica, Bacteria

Not on your lists

24881..25498
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3788
DnaJ-like protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
SCN18_30_10_14_R2_B_scaffold_1478_25
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25495..26139
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3787
SCN18_30_10_14_R2_B_scaffold_1478_26
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26156..27337
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5926
Uncharacterized protein {ECO:0000313|EMBL:EDY21303.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1478_27
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27334..28536
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5925
Uncharacterized protein {ECO:0000313|EMBL:EDL56032.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
pyrrolo-quinoline quinone
SCN18_30_10_14_R2_B_scaffold_1478_28
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28647..29516)
DNA (870bp) protein (290aa)
plasmid partitioning protein ParA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C394A
Partitioning or sporulation protein ParA {ECO:0000313|EMBL:BAL52370.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
chromosome partitioning ATPase
SCN18_30_10_14_R2_B_scaffold_1478_29
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29691..31874
DNA (2184bp) protein (728aa)
glutamine synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C394B
glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:AGA29051.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying items 1-30 of 32 in total

View Taxonomy