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SCN18_30_10_14_R2_B_scaffold_1493

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1493_1
Candidatus Amoebophilus asiaticus_SCNPILOT_CONT_500_P_Amoebophilus_asiaticus_42_9.0, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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68..1069
DNA (1002bp) protein (334aa)
transposase n=3 Tax=Gemmata obscuriglobus RepID=UPI00016C3E05
Transposase {ECO:0000313|EMBL:CDI03170.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
transposase family protein
SCN18_30_10_14_R2_B_scaffold_1493_2
unknown

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comp(1026..1442)
DNA (417bp) protein (139aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1493_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1453..2964)
DNA (1512bp) protein (504aa)
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C409E
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27080.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1493_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3028..3513)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D6FF85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD13635.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
SCN18_30_10_14_R2_B_scaffold_1493_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3693..5048)
DNA (1356bp) protein (452aa)
Hypothetical secreted protein n=1 Tax=uncultured planctomycete 8FN RepID=A9LH09_9BACT
Hypothetical secreted protein {ECO:0000313|EMBL:ABX10686.1}; TaxID=455070 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete 8FN.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1493_6
unknown

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comp(5142..5456)
DNA (315bp) protein (105aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1493_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5453..7009)
DNA (1557bp) protein (519aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000255|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000255|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000255|HAMAP-Rule:MF_00344}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
GMP synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5137
SCN18_30_10_14_R2_B_scaffold_1493_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7107..7928)
DNA (822bp) protein (274aa)
pyrroline-5-carboxylate reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45D5
pyrroline-5-carboxylate reductase
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_1493_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8156..9598
DNA (1443bp) protein (481aa)
Arabinose efflux permease family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJA0_SINAD
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGA29454.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1493_10
unknown

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9733..9987
DNA (255bp) protein (85aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45D3
SCN18_30_10_14_R2_B_scaffold_1493_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10092..14279)
DNA (4188bp) protein (1396aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C495E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25430.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1493_12
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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14481..14888
DNA (408bp) protein (136aa)
hypothetical protein SpalD1_09952 id=3695288 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=GWF2_Planctomycetes_41_51_curated
SCN18_30_10_14_R2_B_scaffold_1493_13
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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14940..15125
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003746A83
UPF0391 membrane protein IDSA_09330 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1493_14
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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15327..16043
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4239
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27857.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1493_15
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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16245..19721
DNA (3477bp) protein (1159aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000382D1DC
PAS/PAC sensor signal transduction histidine kinase
Tax=GWC2_Nitrospirae_57_9_curated
SCN18_30_10_14_R2_B_scaffold_1493_16
unknown

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20006..20314
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C548D
SCN18_30_10_14_R2_B_scaffold_1493_17
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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20361..21134
DNA (774bp) protein (258aa)
chaperone protein HtpG n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C548E
Putative chaperone protein HtpG {ECO:0000313|EMBL:CBI07955.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1493_18
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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21242..24580
DNA (3339bp) protein (1113aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C548F
Fe-S-cluster-containing hydrogenase
Fe-S-cluster-containing hydrogenase {ECO:0000313|EMBL:ADW67158.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_30_10_14_R2_B_scaffold_1493_19
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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24603..25853
DNA (1251bp) protein (417aa)
Polysulphide reductase, NrfD n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5490
polysulfide reductase NrfD
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 {ECO:0000313|EMBL:ABF42003.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCN18_30_10_14_R2_B_scaffold_1493_20
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

25850..26443
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5491
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ92486.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCN18_30_10_14_R2_B_scaffold_1493_21
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26440..27285
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5492
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:CDM66517.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
SCN18_30_10_14_R2_B_scaffold_1493_22
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

27282..28712
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5493
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2 {ECO:0000313|EMBL:CDM66516.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1493_23
unknown

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28699..29484
DNA (786bp) protein (262aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1493_24
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

29545..30456
DNA (912bp) protein (304aa)
SCO1/SenC family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5495
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
SCN18_30_10_14_R2_B_scaffold_1493_25
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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30453..31577
DNA (1125bp) protein (375aa)
cytochrome c oxidase, subunit II n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5496
cytochrome c oxidase subunit II
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_30_10_14_R2_B_scaffold_1493_26
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

31579..33339
DNA (1761bp) protein (587aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACZ42493.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACZ42493.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
cytochrome C oxidase subunit I n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5497
SCN18_30_10_14_R2_B_scaffold_1493_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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33329..34138
DNA (810bp) protein (270aa)
cytochrome oxidase subunit III n=1 Tax=Schlesneria paludicola RepID=UPI00029A60AD
Cytochrome oxidase subunit III {ECO:0000313|EMBL:EAQ77692.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
cytochrome C oxidase subunit III
SCN18_30_10_14_R2_B_scaffold_1493_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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34196..34528
DNA (333bp) protein (111aa)
cytochrome oxidase subunit IV (EC:1.9.3.1)
Putative cytochrome oxidase subunit IV {ECO:0000313|EMBL:CAX21781.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CAX21781.1};; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C549A
Displaying 28 items

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