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SCN18_30_10_14_R2_B_scaffold_1748

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1748_1
unknown

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comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1748_2
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

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354..3572
DNA (3219bp) protein (1073aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJ50_PLABD
HsdR family type I site-specific deoxyribonuclease
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ADY58592.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1748_3
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3569..4300
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJ51_PLABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY58593.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1748_4
unknown

Not on your lists

4410..4970
DNA (561bp) protein (187aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1748_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5106..6251)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5896
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGA26013.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1748_trna_1
unknown

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comp(6365..6437)
DNA (73bp)
transferRNA Lys
SCN18_30_10_14_R2_B_scaffold_1748_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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comp(6540..7469)
DNA (930bp) protein (310aa)
type 11 methyltransferase n=1 Tax=Methylocystis rosea RepID=UPI00036E55CD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:CCJ08437.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCN18_30_10_14_R2_B_scaffold_1748_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7559..9184)
DNA (1626bp) protein (542aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FAE4A8
lysyl-tRNA synthetase
SCN18_30_10_14_R2_B_scaffold_1748_8
unknown

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9240..10115
DNA (876bp) protein (292aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1748_9
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

10186..10938
DNA (753bp) protein (251aa)
Methyltransferase type 11 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57CB
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCN18_30_10_14_R2_B_scaffold_1748_10
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10968..11648
DNA (681bp) protein (227aa)
competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59E5
helix-hairpin-helix protein
Tax=RBG_16_Desulfobacca_60_12_curated
SCN18_30_10_14_R2_B_scaffold_1748_11
unknown

Not on your lists

11987..13189
DNA (1203bp) protein (401aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1748_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13193..14044)
DNA (852bp) protein (284aa)
oxidoreductase, short-chain dehydrogenase/reductase family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4098
Oxidoreductase, short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:BAL54189.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
short-chain dehydrogenase
SCN18_30_10_14_R2_B_scaffold_1748_13
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14146..15360
DNA (1215bp) protein (405aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4097
SCN18_30_10_14_R2_B_scaffold_1748_14
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15333..17036)
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB16302.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Displaying 15 items

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