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SCN18_30_10_14_R2_B_scaffold_1980

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1980_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(75..1637)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000365D291
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75559.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_30_10_14_R2_B_scaffold_1980_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1641..3596)
DNA (1956bp) protein (652aa)
Protein containing DUF1680 n=1 Tax=Rhodopirellula europaea SH398 RepID=M5SA33_9PLAN
Protein containing DUF1680 {ECO:0000313|EMBL:EMI24527.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
ATP binding protein
SCN18_30_10_14_R2_B_scaffold_1980_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3593..4009)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TA80_9PLAN
SCN18_30_10_14_R2_B_scaffold_1980_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4089..4985)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZS0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB16553.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1980_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5023..7983)
DNA (2961bp) protein (987aa)
pectin lyase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B65E8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59299.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_30_10_14_R2_B_scaffold_1980_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8122..8796
DNA (675bp) protein (225aa)
transcriptional regulator, GntR family protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745926
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1980_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9316..11643
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C521B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29873.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1980_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11600..13156
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C521A
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA29874.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1980_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13355..14635
DNA (1281bp) protein (427aa)
probable ATP-binding/permease fusion ABC transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5219
antimicrobial peptide ABC transporter permease
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGA29875.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1980_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14747..15259
DNA (513bp) protein (171aa)
WD-40 repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FDB
Uncharacterized protein {ECO:0000313|EMBL:KIO18777.1}; Flags: Fragment;; TaxID=1051891 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Tulasnellaceae; Tulasnella.;" source="Tulasnella calospora MUT 4182.;"
Surface antigen gene
Displaying 10 items

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