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SCN18_30_10_14_R2_B_scaffold_1987

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1987_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3..2117
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A40
Uncharacterized protein {ECO:0000313|EMBL:KFA91712.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1987_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2131..3270
DNA (1140bp) protein (380aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3857
Uncharacterized protein {ECO:0000313|EMBL:KFA91713.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
VWA containing CoxE family protein
SCN18_30_10_14_R2_B_scaffold_1987_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3981..4391
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627153
snoaL-like polyketide cyclase family protein
SnoaL-like polyketide cyclase family protein {ECO:0000313|EMBL:CDG84649.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
SCN18_30_10_14_R2_B_scaffold_1987_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4444..5082
DNA (639bp) protein (213aa)
UTP:GlnB (Protein PII) uridylyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DI27_SINAD
UTP:GlnB (protein PII) uridylyltransferase
UTP:GlnB (Protein PII) uridylyltransferase {ECO:0000313|EMBL:AGA28326.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1987_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5123..5884)
DNA (762bp) protein (254aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
S-adenosylhomocysteine nucleosidase n=1 Tax=Leucothrix mucor RepID=UPI0003B6BA6A
S-adenosylhomocysteine nucleosidase
SCN18_30_10_14_R2_B_scaffold_1987_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6121..7194)
DNA (1074bp) protein (358aa)
Serine/threonine protein kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR98_SINAD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA31502.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1987_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7538..8845)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363F0A2
MGT family glycosyltransferase
Glycosyltransferase, MGT family {ECO:0000313|EMBL:AFY33079.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCN18_30_10_14_R2_B_scaffold_1987_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8953..9765)
DNA (813bp) protein (271aa)
short-chain dehydrogenase n=1 Tax=Zavarzinella formosa RepID=UPI0002DBC55F
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGA26236.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1987_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9889..10806)
DNA (918bp) protein (306aa)
Probable Xyls/AraC-type transcriptional activator n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UTT5_RHOBA
AraC family transcriptional regulator
Probable Xyls/AraC-type transcriptional activator {ECO:0000313|EMBL:CAD73349.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
SCN18_30_10_14_R2_B_scaffold_1987_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11614..11874)
DNA (261bp) protein (87aa)
SCN18_30_10_14_R2_B_scaffold_1987_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12201..15710)
DNA (3510bp) protein (1170aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E1E991
tetratricopeptide repeat protein,protein kinase family protein
Tetratricopeptide repeat protein,protein kinase family protein {ECO:0000313|EMBL:AGA28623.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1987_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16697..16984
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003187B6A
PAS sensor protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SCN18_30_10_14_R2_B_scaffold_1987_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17057..17275)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FBE
30S ribosomal protein S21
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1987_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17441..17902)
DNA (462bp) protein (154aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C36BB
Uncharacterized protein {ECO:0000313|EMBL:KKL56441.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS4 family protein
SCN18_30_10_14_R2_B_scaffold_1987_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18298..19824
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GQE7_METAL
cpx; cytochrome c peroxidase
Uncharacterized protein {ECO:0000313|EMBL:EIC28606.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
SCN18_30_10_14_R2_B_scaffold_1987_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19875..20510
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4747
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27061.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1987_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20541..20615
DNA (75bp) protein (25aa)
Displaying 17 items

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