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SCN18_30_10_14_R2_B_scaffold_1991

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1991_1
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1174)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35E6
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
SCN18_30_10_14_R2_B_scaffold_1991_2
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1266..2396)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35E7
Putative virion core protein (Lumpy skin disease virus)-like protein {ECO:0000313|EMBL:CDH46941.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
virion core protein (lumpy skin disease virus)-like protein
SCN18_30_10_14_R2_B_scaffold_1991_3
unknown

Not on your lists

comp(2554..2784)
DNA (231bp) protein (77aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1991_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2995..4167
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E5A
Sec-independent protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1991_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4235..5845
DNA (1611bp) protein (537aa)
uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E5B
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AGA30176.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1991_6
unknown

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comp(5838..6023)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E5C
SCN18_30_10_14_R2_B_scaffold_1991_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6308..7873
DNA (1566bp) protein (522aa)
galactarate dehydratase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E5F
altronate dehydratase
Altronate dehydratase {ECO:0000313|EMBL:AGA27494.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1991_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7880..8095
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJE0_ROSCS
hypothetical protein
Tax=CG_Anaero_02
SCN18_30_10_14_R2_B_scaffold_1991_9
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8076..8414
DNA (339bp) protein (113aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJD9_ROSCS
transcriptional modulator of MazE/toxin MazF
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ABU57609.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCN18_30_10_14_R2_B_scaffold_1991_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8422..9618)
DNA (1197bp) protein (399aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C554D
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
SCN18_30_10_14_R2_B_scaffold_1991_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10125..10934)
DNA (810bp) protein (270aa)
metal-dependent hydrolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C26
metal-dependent hydrolase
Putative metal-dependent hydrolase with TIM-barrel fold {ECO:0000313|EMBL:AGA26119.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1991_12
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

11191..11793
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD60_GEMAT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCN18_30_10_14_R2_B_scaffold_1991_13
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

11790..12611
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD61_GEMAT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCN18_30_10_14_R2_B_scaffold_1991_14
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(12793..14337)
DNA (1545bp) protein (515aa)
Conserved hypothetical transmembrane protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467H6_METBF
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:AKB50910.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
SCN18_30_10_14_R2_B_scaffold_1991_15
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14355..15155)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PFS1_RHIML
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78122.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCN18_30_10_14_R2_B_scaffold_1991_16
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15161..15778)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KFJ9_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY98922.1}; Flags: Precursor;; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
SCN18_30_10_14_R2_B_scaffold_1991_17
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16041..16925
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000378CEB9
DNA-binding domain-containing protein
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AGA26118.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1991_18
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17038..17640
DNA (603bp) protein (201aa)
membrane protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CCA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGA26117.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1991_19
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17865..18281
DNA (417bp) protein (139aa)
peroxiredoxin n=1 Tax=Schlesneria paludicola RepID=UPI00029B5626
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EJL37692.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
peroxiredoxin, Ohr subfamily protein
SCN18_30_10_14_R2_B_scaffold_1991_20
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18320..19243
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037CCA7E
Putative nucleoside-diphosphate-sugar epimerase protein {ECO:0000313|EMBL:AEQ20500.1}; TaxID=1091570 species="Bacteria; environmental samples.;" source="uncultured bacterium CSL144.;"
hydroxylase
SCN18_30_10_14_R2_B_scaffold_1991_21
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like

Not on your lists

19278..19991
DNA (714bp) protein (238aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.-)
3-oxoacyl-ACP reductase n=1 Tax=Schlesneria paludicola RepID=UPI00029B180A
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KGM33155.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCN18_30_10_14_R2_B_scaffold_1991_22
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20009..20227
DNA (219bp) protein (73aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
tautomerase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031098B7
oxalocrotonate tautomerase K2
SCN18_30_10_14_R2_B_scaffold_1991_23
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20216..21289)
DNA (1074bp) protein (358aa)
2-nitropropane dioxygenase-like enzyme n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR13_SINAD
2-nitropropane dioxygenase
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:AGA31440.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 23 items

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