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SCN18_30_10_14_R2_B_scaffold_6223

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6223_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..199)
DNA (198bp) protein (66aa)
Transposase, IS4 family protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U0U7_9PLAN
Transposase, IS4 family protein {ECO:0000313|EMBL:EMI55077.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
SCN18_30_10_14_R2_B_scaffold_6223_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(493..1653)
DNA (1161bp) protein (387aa)
Major royal jelly protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TY54_9CYAN
hypothetical protein
Major royal jelly protein {ECO:0000313|EMBL:AFY87303.1}; Flags: Precursor;; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
SCN18_30_10_14_R2_B_scaffold_6223_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1684..2856)
DNA (1173bp) protein (391aa)
Acetylornithine aminotransferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGD6_CORCM
Acetylornithine aminotransferase {ECO:0000313|EMBL:KKQ60257.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
argD; acetylornithine aminotransferase
SCN18_30_10_14_R2_B_scaffold_6223_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3012..3461)
DNA (450bp) protein (150aa)
PfpI family intracellular protease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFB9_9BRAD
PfpI family intracellular protease {ECO:0000313|EMBL:ERF83131.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative intracellular protease, PfpI family
SCN18_30_10_14_R2_B_scaffold_6223_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3625..4803)
DNA (1179bp) protein (393aa)
S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;; Glutathione-dependent formaldehyde dehydrogenase; Short=FALDH;; Short=FDH;; TaxID=34058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter marinus.;"
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Methylobacter marinus RepID=FADH_METMR
fdh2; zinc-binding dehydrogenase family oxidoreductase
SCN18_30_10_14_R2_B_scaffold_6223_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4800..5219)
DNA (420bp) protein (140aa)
cyclase/dehydrase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38DD
SCN18_30_10_14_R2_B_scaffold_6223_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6246..9299)
DNA (3054bp) protein (1018aa)
sensor histidine kinase/response regulator hybrid protein (EC:2.7.13.3)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53D1
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SCN18_30_10_14_R2_B_scaffold_6223_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9872..10555)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E7C9D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06262.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Displaying 8 items

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