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SCN18_30_10_14_R2_B_scaffold_3286

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3286_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3..137
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW76_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84459.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3286_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(227..1264)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E951DA
Uncharacterized protein {ECO:0000313|EMBL:EDL61212.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3286_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1753..4281)
DNA (2529bp) protein (843aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AC877
Uncharacterized protein {ECO:0000313|EMBL:EDL61213.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3286_4
unknown

Not on your lists

4406..5122
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C498D
SCN18_30_10_14_R2_B_scaffold_3286_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5240..5728
DNA (489bp) protein (163aa)
transcription elongation factor GreA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C498C
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
transcription elongation factor GreA
SCN18_30_10_14_R2_B_scaffold_3286_6
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6143..6661
DNA (519bp) protein (173aa)
adenylate cyclase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C498B
Transcriptional regulator {ECO:0000313|EMBL:CDO86411.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
cyaA; adenylate cyclase
SCN18_30_10_14_R2_B_scaffold_3286_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6694..6957)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4989
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24929.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3286_8
unknown

Not on your lists

7075..7437
DNA (363bp) protein (121aa)
SCN18_30_10_14_R2_B_scaffold_3286_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7470..8333)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A5C
Uncharacterized protein {ECO:0000313|EMBL:EFH80235.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCN18_30_10_14_R2_B_scaffold_3286_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8682..10223
DNA (1542bp) protein (514aa)
FAD linked oxidase domain-containing protein (EC:1.1.3.8)
FAD linked oxidase domain protein {ECO:0000313|EMBL:ACC82111.1}; EC=1.1.3.8 {ECO:0000313|EMBL:ACC82111.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DB351F
SCN18_30_10_14_R2_B_scaffold_3286_11
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10236..10592)
DNA (357bp) protein (119aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003019D0A
pterin-4a-carbinolamine dehydratase
SCN18_30_10_14_R2_B_scaffold_3286_12
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10855..12627)
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4015
SCN18_30_10_14_R2_B_scaffold_3286_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12759..14333)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4016
Uncharacterized protein {ECO:0000313|EMBL:EMI53888.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3286_14
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14655..16184)
DNA (1530bp) protein (510aa)
probable general secretion pathway protein K n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4017
Probable general secretion pathway protein K {ECO:0000313|EMBL:EDL57400.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3286_15
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists


comp(16364..17827)
DNA (1464bp) protein (488aa)
Uncharacterized protein (Fragment) n=1 Tax=Ficedula albicollis RepID=U3KHX4_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000014628}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
30S ribosomal protein S3
SCN18_30_10_14_R2_B_scaffold_3286_16
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17824..18315)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4018
Uncharacterized protein {ECO:0000313|EMBL:EDL57402.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
type II secretion system protein I/J
SCN18_30_10_14_R2_B_scaffold_3286_17
unknown

Not on your lists

comp(18315..18818)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4019
SCN18_30_10_14_R2_B_scaffold_3286_18
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19027..19479)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C401A
Type II secretion system protein G {ECO:0000313|EMBL:CDX21269.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
general secretion pathway protein G
SCN18_30_10_14_R2_B_scaffold_3286_19
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(19819..21033)
DNA (1215bp) protein (405aa)
type 4 fimbrial assembly protein pilC, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47D4
Type 4 fimbrial assembly protein pilC {ECO:0000313|EMBL:EDL57405.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
type II secretion system protein
SCN18_30_10_14_R2_B_scaffold_3286_20
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21144..22907)
DNA (1764bp) protein (588aa)
general secretion pathway protein E n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47D5
General secretion pathway protein E {ECO:0000313|EMBL:EAQ78876.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
type II secretion system protein E (GspE)
SCN18_30_10_14_R2_B_scaffold_3286_21
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23093..23764
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQC6_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34426.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCN18_30_10_14_R2_B_scaffold_3286_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23743..24822)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5212
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17148.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_3286_23
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24867..24962)
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D7DD18
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:ABX06867.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Displaying 23 items

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