ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3943

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3943_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..1463)
DNA (1461bp) protein (487aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C534F
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48215.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_30_10_14_R2_B_scaffold_3943_2
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists

comp(1618..2787)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Oryza brachyantha RepID=J3NA02_ORYBR
Uncharacterized protein {ECO:0000313|EMBL:ERN03927.1}; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella.;" source="Amborella trichopoda.;"
regulator
SCN18_30_10_14_R2_B_scaffold_3943_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2962..4302
DNA (1341bp) protein (447aa)
probable sodium extrusion protein NatB n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3531
Na+ efflux pump ABC transporter permease
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:AGA30182.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3943_4
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..5372)
DNA (954bp) protein (318aa)
branched-chain amino acid aminotransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5215
class IV aminotransferase
Tax=CG_Arma_01
SCN18_30_10_14_R2_B_scaffold_3943_5
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5369..5866)
DNA (498bp) protein (166aa)
Dual specificity protein phosphatase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZS5_ISOPI
Dual specificity protein phosphatase
Dual specificity protein phosphatase {ECO:0000313|EMBL:ADV63216.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3943_6
unknown

Not on your lists

comp(5863..6033)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E447FC
SCN18_30_10_14_R2_B_scaffold_3943_7
unknown

Not on your lists

comp(6030..6482)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E447FC
SCN18_30_10_14_R2_B_scaffold_3943_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6532..7566)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17405.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_3943_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7650..8069)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29041.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3943_10
SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8238..9977
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E23DC5
WD40 repeat-like protein
FOG: WD40 repeat-like protein {ECO:0000313|EMBL:ADB15948.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_3943_11
unknown

Not on your lists

comp(10074..10817)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FF7
SCN18_30_10_14_R2_B_scaffold_3943_12
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10910..13165)
DNA (2256bp) protein (752aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030D49F2
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:ABK49634.1}; TaxID=94122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain ANA-3).;"
SCN18_30_10_14_R2_B_scaffold_3943_13
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13456..14724
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEP4_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03569.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Displaying 13 items

View Taxonomy