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SCN18_30_10_14_R2_B_scaffold_8214

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_8214_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1633
DNA (1632bp) protein (544aa)
WD-40 repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FDB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_8214_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1619..2218)
DNA (600bp) protein (200aa)
nicotinamidase (EC:3.5.1.19)
Nicotinamidase {ECO:0000313|EMBL:ACY47719.1}; EC=3.5.1.19 {ECO:0000313|EMBL:ACY47719.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
probable pyrazinamidase/nicotinamidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C422F
SCN18_30_10_14_R2_B_scaffold_8214_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2237..2965)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FAD
Uncharacterized protein {ECO:0000313|EMBL:ETW94681.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_8214_4
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3027..3551
DNA (525bp) protein (175aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
NADH dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FAE
NADH (or F420H2) dehydrogenase subunit C
SCN18_30_10_14_R2_B_scaffold_8214_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3692..4105
DNA (414bp) protein (138aa)
Translation initiation factor IF-2 n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XBH8_MYCNE
translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
SCN18_30_10_14_R2_B_scaffold_8214_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4215..4730)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51DD
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ADB15656.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_8214_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4932..5543)
DNA (612bp) protein (204aa)
ribosomal protein L9 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4099
50S ribosomal protein L9
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_8214_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5655..6239)
DNA (585bp) protein (195aa)
single-strand DNA binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C409A
ssb; single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
SCN18_30_10_14_R2_B_scaffold_8214_9
unknown

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comp(6389..6508)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 9 items

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