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SCN18_30_10_14_R2_B_scaffold_803

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_803_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..254
DNA (252bp) protein (84aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IT7_RHOP5
ABC transporter permease {ECO:0000313|EMBL:KJC58194.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
inner-membrane translocator
SCN18_30_10_14_R2_B_scaffold_803_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

341..1579
DNA (1239bp) protein (413aa)
Inner-membrane translocator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI86_TISMK
livM; inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AFK52474.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_30_10_14_R2_B_scaffold_803_3
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..2328
DNA (753bp) protein (251aa)
ABC transporter related protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI85_TISMK
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC58195.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
braF; ABC transporter
SCN18_30_10_14_R2_B_scaffold_803_4
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2325..2669
DNA (345bp) protein (115aa)
ABC transporter related protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI84_TISMK
Mannosyltransferase {ECO:0000313|EMBL:KJC58488.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
livF; ABC transporter
SCN18_30_10_14_R2_B_scaffold_803_5
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2687..2944
DNA (258bp) protein (86aa)
hypothetical protein, partial n=1 Tax=Afipia birgiae RepID=UPI00036F756C
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ08150.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_30_10_14_R2_B_scaffold_803_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3057..3299
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTE7_9SPHN
Prevent-host-death protein {ECO:0000313|EMBL:ETR74838.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
prevent-host-death family protein
SCN18_30_10_14_R2_B_scaffold_803_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3299..3634
DNA (336bp) protein (112aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Twitching motility protein PilT n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTQ6_9RHIZ
PilT protein-like
SCN18_30_10_14_R2_B_scaffold_803_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3891..4787)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6Y5_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCV11898.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
LysR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_803_9
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5057..5791
DNA (735bp) protein (245aa)
Dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQC0_9RHIZ
Dehydrogenase {ECO:0000313|EMBL:ESX82811.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
dehydrogenase
SCN18_30_10_14_R2_B_scaffold_803_10
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5879..6478
DNA (600bp) protein (200aa)
UPI0003CF8224 related cluster n=1 Tax=unknown RepID=UPI0003CF8224
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:ESW87671.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
NADP oxidoreductase coenzyme F420-dependent
SCN18_30_10_14_R2_B_scaffold_803_11
SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, Plasmid-like

Not on your lists

comp(7044..7919)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA015 RepID=U9MH39_PSEAI
KY49.ctg7180000000022_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP15314.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_803_12
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(7919..8722)
DNA (804bp) protein (268aa)
HhH-GPD family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNU2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KID08399.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
A/G-specific DNA glycosylase
SCN18_30_10_14_R2_B_scaffold_803_13
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(8676..10208)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Streptomyces filamentosus RepID=UPI0001AEEC04
Uncharacterized protein {ECO:0000313|EMBL:EWS95270.1}; TaxID=457430 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NRRL 11379.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_803_14
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10362..14552)
DNA (4191bp) protein (1397aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003749C42
Uncharacterized protein {ECO:0000313|EMBL:KID08401.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_803_15
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14572..16110)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00036A9DCC
Uncharacterized protein {ECO:0000313|EMBL:KAJ56296.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
SCN18_30_10_14_R2_B_scaffold_803_16
unknown

Not on your lists

comp(16107..18362)
DNA (2256bp) protein (752aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_803_17
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

comp(18364..19704)
DNA (1341bp) protein (447aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003D037DD related cluster n=1 Tax=unknown RepID=UPI0003D037DD
DNA-cytosine methyltransferase
SCN18_30_10_14_R2_B_scaffold_803_18
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19796..20023)
DNA (228bp) protein (76aa)
Transcriptional regulator, XRE family n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFM7_ANASK
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACG75154.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
SCN18_30_10_14_R2_B_scaffold_803_19
SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, Plasmid-like

Not on your lists

20228..20563
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAP9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57205.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_20
SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, Plasmid-like

Not on your lists

20556..21803
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B150_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57204.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_21
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21800..22924
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2K5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57203.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23180..24133
DNA (954bp) protein (318aa)
Antirestriction protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4Q1_9RHIZ
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:AGK57202.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24307..26433
DNA (2127bp) protein (709aa)
ParB domain-containing protein nuclease n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9J2_9RHIZ
ParB domain-containing protein nuclease
ParB domain-containing protein nuclease {ECO:0000313|EMBL:AGK57201.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26643..30968
DNA (4326bp) protein (1442aa)
Methylase/helicase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAP4_9RHIZ
methylase/helicase
Methylase/helicase {ECO:0000313|EMBL:AGK57200.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_25
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30968..32020
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4X8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53008.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_803_26
SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, SCNPILOT_CONT_500_BF_Plasmid_63_93, Plasmid-like

Not on your lists

32301..33272
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4X9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53009.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_803_27
unknown

Not on your lists

33269..33400
DNA (132bp) protein (44aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_803_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33771..34253
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4P5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57197.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_29
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34798..35118
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAN9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57195.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_803_30
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35212..35727
DNA (516bp) protein (172aa)
Response regulator receiver protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH64_9RHIZ
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AGK59786.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying items 1-30 of 35 in total

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