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SCN18_30_10_14_R2_B_scaffold_1003

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1003_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1766
DNA (1764bp) protein (588aa)
Conserved hypothetical 65.5 kDa protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UJT8_CYAP2
Uncharacterized protein {ECO:0000313|EMBL:KJC46033.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1003_2
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1777..2976)
DNA (1200bp) protein (400aa)
Flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase n=1 Tax=Rhizobium sp. CF142 RepID=J2ATK8_9RHIZ
monooxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCN18_30_10_14_R2_B_scaffold_1003_3
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2996..3763)
DNA (768bp) protein (256aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ01_PSEUX
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA27197.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R2_B_scaffold_1003_4
unknown

Not on your lists

comp(3854..4342)
DNA (489bp) protein (163aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1003_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4451..6658)
DNA (2208bp) protein (736aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCG9_METS4
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:ACA16642.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R2_B_scaffold_1003_6
unknown

Not on your lists

comp(6698..7087)
DNA (390bp) protein (130aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1003_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7190..7945)
DNA (756bp) protein (252aa)
phbB5; acetoacetyl-CoA reductase 5 (EC:1.1.1.36)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Citreicella sp. 357 RepID=I1B0X8_9RHOB
2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase {ECO:0000313|EMBL:ETR76164.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_30_10_14_R2_B_scaffold_1003_8
unknown

Not on your lists

comp(8065..8451)
DNA (387bp) protein (129aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1003_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8521..9306
DNA (786bp) protein (262aa)
SPFH domain / Band 7 family protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5AFS1_RALSL
Uncharacterized protein {ECO:0000313|EMBL:GAN78337.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Putative stomatin/prohibitin-family membrane protease subunit
SCN18_30_10_14_R2_B_scaffold_1003_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9303..10757)
DNA (1455bp) protein (485aa)
Multidrug resistance protein B n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQ77_GRABC
Major facilitator superfamily multidrug resistance transporter {ECO:0000313|EMBL:GAN77962.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Multidrug resistance protein B
SCN18_30_10_14_R2_B_scaffold_1003_11
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

11182..11478
DNA (297bp) protein (99aa)
Transcriptional regulator, XRE family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EZZ9_9RHIZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CCV09505.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
XRE family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_1003_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11486..12346)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1CRS3_EMIHU
Putative esterase/lipase {ECO:0000313|EMBL:AHZ45676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase fold-3 domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1003_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12364..13338)
DNA (975bp) protein (325aa)
Alcohol dehydrogenase, zinc-binding domain protein n=3 Tax=Acidiphilium RepID=A5G1D8_ACICJ
qor; quinone oxidoreductase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABQ31670.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCN18_30_10_14_R2_B_scaffold_1003_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13377..13829)
DNA (453bp) protein (151aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
Methylated-DNA--protein-cysteine methyltransferase n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HE18_GLUDA
methylated-DNA--protein-cysteine methyltransferase
SCN18_30_10_14_R2_B_scaffold_1003_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13899..15959)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A610_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL97321.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1003_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16000..17187
DNA (1188bp) protein (396aa)
Beta-lactamase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAD7_RHOPT
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACE99023.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCN18_30_10_14_R2_B_scaffold_1003_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17310..18560)
DNA (1251bp) protein (417aa)
Methyltransferase (EC:2.1.1.-)
Methyltransferase {ECO:0000313|EMBL:AHJ62211.1}; EC=2.1.1.- {ECO:0000313|EMBL:AHJ62211.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Methyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV11_GRABC
SCN18_30_10_14_R2_B_scaffold_1003_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18585..19163
DNA (579bp) protein (193aa)
23S rRNA methyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV10_GRABC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ62213.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R2_B_scaffold_1003_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19208..19780
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV09_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN77626.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1003_20
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19777..20979
DNA (1203bp) protein (401aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
iron-sulfur (Fe-S) cluster redox enzyme (EC:2.1.1.-)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QG28_GLUHA
SCN18_30_10_14_R2_B_scaffold_1003_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20942..22189
DNA (1248bp) protein (416aa)
Transporter, major facilitator family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHV3_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFH13118.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
major facilitator superfamily protein
SCN18_30_10_14_R2_B_scaffold_1003_22
unknown

Not on your lists

comp(22132..23154)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C0EC7
SCN18_30_10_14_R2_B_scaffold_1003_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23226..24455
DNA (1230bp) protein (410aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=ASSY_GRABC
SCN18_30_10_14_R2_B_scaffold_1003_24

Not on your lists

24484..25251
DNA (768bp) protein (256aa)
UDG id=125214 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Uncharacterized protein {ECO:0000313|EMBL:EKD26257.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_30_10_14_R2_B_scaffold_1003_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25325..27754)
DNA (2430bp) protein (810aa)
DNA translocase FtsK n=3 Tax=Acidiphilium RepID=A5FVH1_ACICJ
cell division protein FtsK
DNA translocase FtsK {ECO:0000313|EMBL:ABQ29603.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCN18_30_10_14_R2_B_scaffold_1003_26
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27854..28540)
DNA (687bp) protein (229aa)
Ammonium transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXE3_9PROT
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Ammonium transporter
Displaying 26 items

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