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SCN18_30_10_14_R2_B_scaffold_1149

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1149_1
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82..675)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Dickeya zeae (strain Ech1591) RepID=C6CI96_DICZE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT05342.1}; TaxID=561229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae (strain Ech1591).;"
SCN18_30_10_14_R2_B_scaffold_1149_2
unknown

Not on your lists

comp(949..1287)
DNA (339bp) protein (113aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1149_3
unknown

Not on your lists

comp(1314..1673)
DNA (360bp) protein (120aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1149_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1707..2408)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XW48_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN75793.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_1149_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2425..2784)
DNA (360bp) protein (120aa)
SCN18_30_10_14_R2_B_scaffold_1149_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2784..5129)
DNA (2346bp) protein (782aa)
DotL n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IL38_BEII9
DotL
DotL {ECO:0000313|EMBL:ACB97238.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5497..6819)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IL35_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97235.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6816..7388)
DNA (573bp) protein (191aa)
Lytic transglycosylase catalytic n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IL34_BEII9
lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACB97234.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7385..7768)
DNA (384bp) protein (128aa)
SCN18_30_10_14_R2_B_scaffold_1149_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7801..8049)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E627C5
IcmT {ECO:0000313|EMBL:KGB22051.1}; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
IcmT
SCN18_30_10_14_R2_B_scaffold_1149_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8163..9353)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003061E64
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACB97231.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9375..10328)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F1C15D
DotC
DotC {ECO:0000313|EMBL:ACB97230.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10321..10785)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IL29_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97229.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_14
unknown

Not on your lists

comp(10785..11003)
DNA (219bp) protein (73aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1149_15
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11265..11633
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWW8_METTR
Uncharacterized protein {ECO:0000313|EMBL:EXL02239.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
PF06296 family protein
SCN18_30_10_14_R2_B_scaffold_1149_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11630..11953
DNA (324bp) protein (108aa)
Putative DNA-binding protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WH01_9SPHN
Putative DNA-binding protein {ECO:0000313|EMBL:EIZ79576.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
putative transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_1149_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12021..15071)
DNA (3051bp) protein (1017aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E63A5E
DotO
DotO {ECO:0000313|EMBL:ACB97399.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15071..15664)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILJ8_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97398.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_19
unknown

Not on your lists

comp(15664..15981)
DNA (318bp) protein (106aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1149_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16037..16486)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILJ7_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97397.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16740..17288)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILJ5_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97395.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17302..18720)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036B2DF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK86042.1}; TaxID=634177 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;"
SCN18_30_10_14_R2_B_scaffold_1149_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18790..20052)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILJ3_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97393.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20052..21047)
DNA (996bp) protein (332aa)
DotH n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILJ2_BEII9
DotH
DotH {ECO:0000313|EMBL:ACB97392.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21064..21693)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DCF0D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97391.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21712..22998)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILJ0_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97390.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_27
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(23101..23544)
DNA (444bp) protein (148aa)
Helix-turn-helix domain protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5Q1T4_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:KKS01666.1}; TaxID=1618415 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
helix-turn-helix domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1149_28
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23757..24167
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILI8_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97388.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1149_29
unknown

Not on your lists

24222..24692
DNA (471bp) protein (157aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1149_30
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24689..24976
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ILI6_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97386.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Displaying 30 items

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