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SCN18_30_10_14_R2_B_scaffold_1616

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1616_1
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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comp(2..808)
DNA (807bp) protein (269aa)
Phosphoesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6T6_9BRAD
Phosphoesterase family protein {ECO:0000313|EMBL:CEG09602.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phosphoesterase
SCN18_30_10_14_R2_B_scaffold_1616_2
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1379..2098
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SBI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD91564.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
SCN18_30_10_14_R2_B_scaffold_1616_3
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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2098..3273
DNA (1176bp) protein (392aa)
Putative Glycosyl transferase, family 2 n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SBJ0_9BRAD
Putative Glycosyl transferase, family 2 {ECO:0000313|EMBL:CCD91567.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
glycosyl transferase family protein
SCN18_30_10_14_R2_B_scaffold_1616_4
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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3270..4325
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SBI9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD91566.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1616_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4374..4685)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGC1_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA20118.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R2_B_scaffold_1616_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4675..7224)
DNA (2550bp) protein (850aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XRY5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS40358.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
formate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_1616_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7279..7875)
DNA (597bp) protein (199aa)
Molybdopterin oxidoreductase Fe4S4 region n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGB9_METS4
molybdopterin oxidoreductase Fe4S4 region
Molybdopterin oxidoreductase Fe4S4 region {ECO:0000313|EMBL:ACA20116.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R2_B_scaffold_1616_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7995..8216
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YIF4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS40360.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1616_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8227..9111
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y0I2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS40361.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
4Fe-4S ferredoxin
SCN18_30_10_14_R2_B_scaffold_1616_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9239..10174
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035F7ED7
polysulfide reductase NrfD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ACA20113.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R2_B_scaffold_1616_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10217..11164
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000364A753
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EFH09223.1}; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
lytic transglycosylase
SCN18_30_10_14_R2_B_scaffold_1616_12
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11195..11449
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MD78_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET91940.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCN18_30_10_14_R2_B_scaffold_1616_trna_2
unknown

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comp(11621..11709)
DNA (89bp)
transferRNA SeC(p)
SCN18_30_10_14_R2_B_scaffold_1616_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..13608)
DNA (1887bp) protein (629aa)
translation elongation factor n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037F5BEB
selB; selenocysteine-specific translation elongation factor
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AIQ91208.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
SCN18_30_10_14_R2_B_scaffold_1616_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13631..14260)
DNA (630bp) protein (210aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZSS6_9PROT
SCN18_30_10_14_R2_B_scaffold_1616_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14351..14755)
DNA (405bp) protein (135aa)
Protein ApaG n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZH5_9PROT
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ApaG protein
SCN18_30_10_14_R2_B_scaffold_1616_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14828..16039)
DNA (1212bp) protein (404aa)
O-succinylhomoserine sulfhydrylase (EC:4.2.99.-)
O-succinylhomoserine sulfhydrylase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW15_GRABC
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:GAN76128.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_1616_17
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16288..16569
DNA (282bp) protein (94aa)
plasmid maintenance system killer protein n=1 Tax=Actinomyces timonensis RepID=UPI0002DD7A86
plasmid maintenance system killer protein
Plasmid maintenance system killer family protein {ECO:0000313|EMBL:KFJ13350.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCN18_30_10_14_R2_B_scaffold_1616_18
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16588..16884
DNA (297bp) protein (99aa)
Plasmid maintenance system antidote protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9L1_MAGSA
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:BAE49464.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCN18_30_10_14_R2_B_scaffold_1616_trna_1
unknown

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16975..17045
DNA (71bp)
transferRNA Gly
SCN18_30_10_14_R2_B_scaffold_1616_19
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17121..17438
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MZ5_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61213.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_30_10_14_R2_B_scaffold_1616_20
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17512..17985
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MZ6_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61212.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying 22 items

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