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SCN18_30_10_14_R2_B_scaffold_492

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Displaying items 1-30 of 89 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_492_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..5797
DNA (5796bp) protein (1932aa)
Putative serine protease/outer membrane autotransporter n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D6M3_LARHH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71303.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R2_B_scaffold_492_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6255..6413
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11318.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_492_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7030..7587
DNA (558bp) protein (186aa)
bacterioferritin n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57AA1
Ferritin Dps family protein {ECO:0000313|EMBL:EJU14849.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
bacterioferritin
SCN18_30_10_14_R2_B_scaffold_492_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7603..8862
DNA (1260bp) protein (420aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Novosphingobium sp. AP12 RepID=J2GT60_9SPHN
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJL33535.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
FAD dependent oxidoreductase
SCN18_30_10_14_R2_B_scaffold_492_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9495..11075
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48A46
Uncharacterized protein {ECO:0000313|EMBL:EJL26067.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_492_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11072..11788
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000366DC0F
Chemotaxis protein CheY {ECO:0000313|EMBL:AHE56895.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
two-component system response regulator
SCN18_30_10_14_R2_B_scaffold_492_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11785..13365
DNA (1581bp) protein (527aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SW49_CAUSK
integral membrane sensor signal transduction histidine kinase
SCN18_30_10_14_R2_B_scaffold_492_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13378..15003)
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000365AB0B
Saccharopine dehydrogenase {ECO:0000313|EMBL:AJR24683.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
saccharopine dehydrogenase
SCN18_30_10_14_R2_B_scaffold_492_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15000..15089)
DNA (90bp) protein (30aa)
SCN18_30_10_14_R2_B_scaffold_492_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15086..16333)
DNA (1248bp) protein (416aa)
monooxygenase n=1 Tax=Sphingomonas melonis RepID=UPI00037AC57A
Scaffold31, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30220.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
amine oxidase
SCN18_30_10_14_R2_B_scaffold_492_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16726..16908
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWZ3_PARAH
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_30_10_14_R2_B_scaffold_492_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17077..17568)
DNA (492bp) protein (164aa)
MarR family transcriptional regulator n=1 Tax=Erwinia billingiae (strain Eb661) RepID=D8MSF9_ERWBE
MarR family transcriptional regulator {ECO:0000313|EMBL:KGT91664.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
MarR family transcripitonal regulator
SCN18_30_10_14_R2_B_scaffold_492_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17632..18576
DNA (945bp) protein (315aa)
Alcohol dehydrogenase zinc-binding protein domain-containing protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DFL6_9BURK
Alcohol dehydrogenase zinc-binding domain-containing protein {ECO:0000313|EMBL:GAN55538.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
alcohol dehydrogenase zinc-binding protein domain-containing protein
SCN18_30_10_14_R2_B_scaffold_492_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18776..19444)
DNA (669bp) protein (223aa)
outer membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI00026308B0
Outer membrane protein {ECO:0000313|EMBL:EZP54178.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
outer membrane protein
SCN18_30_10_14_R2_B_scaffold_492_15
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19441..21285)
DNA (1845bp) protein (615aa)
Sodium:proton antiporter n=1 Tax=Sphingobium baderi LL03 RepID=T0GR09_9SPHN
Sodium:proton antiporter {ECO:0000313|EMBL:EQB02413.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
sodium:proton antiporter
SCN18_30_10_14_R2_B_scaffold_492_16
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21634..21927)
DNA (294bp) protein (98aa)
SCN18_30_10_14_R2_B_scaffold_492_17
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21971..22390)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGA2_PHEZH
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_30_10_14_R2_B_scaffold_492_18
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22703..23290)
DNA (588bp) protein (196aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SEX3_9SPHN
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGH49167.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_30_10_14_R2_B_scaffold_492_19
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23365..24633)
DNA (1269bp) protein (423aa)
Metallophosphoesterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZJ2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53595.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
metallophosphoesterase
SCN18_30_10_14_R2_B_scaffold_492_20
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24654..27035)
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EMB8_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:GAO53596.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
SCN18_30_10_14_R2_B_scaffold_492_21
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27230..27727
DNA (498bp) protein (166aa)
transposase IS4 n=1 Tax=Sphingomonas wittichii RepID=UPI00035ED594
Transposase {ECO:0000313|EMBL:EEZ33761.1}; Flags: Fragment;; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
transposase, IS4
SCN18_30_10_14_R2_B_scaffold_492_22
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27800..28183
DNA (384bp) protein (128aa)
UPI0003D632DB related cluster n=1 Tax=unknown RepID=UPI0003D632DB
Uncharacterized protein {ECO:0000313|EMBL:AKH43040.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
SCN18_30_10_14_R2_B_scaffold_492_23
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28180..28335
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T8K2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT70063.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
pyridoxamine 5'-phosphate oxidase
SCN18_30_10_14_R2_B_scaffold_492_24
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28686..28973)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48208
SCN18_30_10_14_R2_B_scaffold_492_25
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29110..31350)
DNA (2241bp) protein (747aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
katG; Catalase-peroxidase (EC:1.11.1.21)
catalase/hydroperoxidase HPI(I) n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4148B
SCN18_30_10_14_R2_B_scaffold_492_26
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32357..34864
DNA (2508bp) protein (836aa)
dimethylglycine dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003752329
Uncharacterized protein {ECO:0000313|EMBL:EGD58276.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
dimethylglycine dehydrogenase-like protein
SCN18_30_10_14_R2_B_scaffold_492_27
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34869..36116
DNA (1248bp) protein (416aa)
(Fe-S)-binding protein (EC:1.14.-.-)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAU4_9SPHN
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EGD58278.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCN18_30_10_14_R2_B_scaffold_492_28
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36116..37369
DNA (1254bp) protein (418aa)
Sarcosine oxidase beta subunit family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAU3_9SPHN
Sarcosine oxidase beta subunit family protein {ECO:0000313|EMBL:EGD58279.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
soxB; sarcosine oxidase subunit beta
SCN18_30_10_14_R2_B_scaffold_492_29
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37383..37655
DNA (273bp) protein (91aa)
soxD; sarcosine oxidase, subunit delta (EC:1.5.3.1)
sarcosine oxidase subunit delta n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3508F
Sarcosine oxidase, subunit delta {ECO:0000313|EMBL:EGD58280.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCN18_30_10_14_R2_B_scaffold_492_30
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37652..40516
DNA (2865bp) protein (955aa)
Sarcosine oxidase, subunit alpha n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAU1_9SPHN
Sarcosine oxidase, subunit alpha {ECO:0000313|EMBL:EGD58281.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
soxA; sarcosine oxidase, alpha subunit
Displaying items 1-30 of 89 in total

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