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SCN18_30_10_14_R2_B_scaffold_1541

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1541_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..308)
DNA (306bp) protein (102aa)
SCN18_30_10_14_R2_B_scaffold_1541_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362..1054)
DNA (693bp) protein (231aa)
Putative phage repressor n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HBE1_RHIRD
Repressor protein C {ECO:0000313|EMBL:KGE81461.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
C repressor protein
SCN18_30_10_14_R2_B_scaffold_1541_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1192..1431)
DNA (240bp) protein (80aa)
SCN18_30_10_14_R2_B_scaffold_1541_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1453..1716)
DNA (264bp) protein (88aa)
SCN18_30_10_14_R2_B_scaffold_1541_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1900..2022
DNA (123bp) protein (41aa)
SCN18_30_10_14_R2_B_scaffold_1541_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2038..2427
DNA (390bp) protein (130aa)
SCN18_30_10_14_R2_B_scaffold_1541_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2424..2753
DNA (330bp) protein (110aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J2H9_DEIGD
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
SCN18_30_10_14_R2_B_scaffold_1541_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2866..3747
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000379D26A
Uncharacterized protein {ECO:0000313|EMBL:KKL86564.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_1541_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3744..4343
DNA (600bp) protein (200aa)
SCN18_30_10_14_R2_B_scaffold_1541_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4558..5070
DNA (513bp) protein (171aa)
SCN18_30_10_14_R2_B_scaffold_1541_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5237..5893
DNA (657bp) protein (219aa)
UPI0003D011D9 related cluster n=1 Tax=unknown RepID=UPI0003D011D9
Uncharacterized protein {ECO:0000313|EMBL:ESZ64058.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1541_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6649..7233)
DNA (585bp) protein (195aa)
2OG-Fe(II) oxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6Y9_MESOW
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:AEH87459.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_30_10_14_R2_B_scaffold_1541_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7623..7841
DNA (219bp) protein (73aa)
SCN18_30_10_14_R2_B_scaffold_1541_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7790..7996)
DNA (207bp) protein (69aa)
SCN18_30_10_14_R2_B_scaffold_1541_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8397..9038
DNA (642bp) protein (214aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_30_10_14_R2_B_scaffold_1541_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9266..9892
DNA (627bp) protein (209aa)
SCN18_30_10_14_R2_B_scaffold_1541_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10258..11433
DNA (1176bp) protein (392aa)
Histidinol-phosphate transaminase (EC:2.6.1.9)
aminotransferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD61D
Aminotransferase {ECO:0000313|EMBL:KEQ53154.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCN18_30_10_14_R2_B_scaffold_1541_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11672..12151
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F383_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV10766.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
3-demethylubiquinone-9 3-methyltransferase
SCN18_30_10_14_R2_B_scaffold_1541_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12207..12857)
DNA (651bp) protein (217aa)
SCN18_30_10_14_R2_B_scaffold_1541_20
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13378..14010
DNA (633bp) protein (211aa)
Glutathione S-transferase domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VP26_CAUST
glutathione S-transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_30_10_14_R2_B_scaffold_1541_21
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..14942
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003620D5C
probable conserved integral membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
SCN18_30_10_14_R2_B_scaffold_1541_22
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14967..15956)
DNA (990bp) protein (330aa)
AraC family transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B915_9RHIZ
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AGK59518.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_1541_23
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16130..16972
DNA (843bp) protein (281aa)
Putative methyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2E3_9BRAD
Putative methyltransferase {ECO:0000313|EMBL:EAQ33598.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
type 11 methyltransferase
SCN18_30_10_14_R2_B_scaffold_1541_24
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17144..17677
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030C653F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48841.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_30_10_14_R2_B_scaffold_1541_25
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17785..18864
DNA (1080bp) protein (360aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV2_SOLUE
NHL repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_30_10_14_R2_B_scaffold_1541_26
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19020..19922
DNA (903bp) protein (301aa)
Lipolytic protein G-D-S-L family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CKK0_9BACE
hypothetical protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CDA72021.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
SCN18_30_10_14_R2_B_scaffold_1541_27
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20076..20531
DNA (456bp) protein (152aa)
Endoribonuclease L-PSP n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPG0_KORVE
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABF41240.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCN18_30_10_14_R2_B_scaffold_1541_28
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20757..20861)
DNA (105bp) protein (35aa)
SCN18_30_10_14_R2_B_scaffold_1541_29
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21131..21388
DNA (258bp) protein (86aa)
SCN18_30_10_14_R2_B_scaffold_1541_30
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21587..21835
DNA (249bp) protein (83aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZY2_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR91751.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
Displaying items 1-30 of 33 in total

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