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SCN18_30_10_14_R2_B_scaffold_1269

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1269_1
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..646)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381F726
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:AEH84989.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_30_10_14_R2_B_scaffold_1269_2
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(853..2016)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369FD60
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:AID33826.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
mandelate racemase/muconate lactonizing protein
SCN18_30_10_14_R2_B_scaffold_1269_3
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2013..2471)
DNA (459bp) protein (153aa)
transketolase n=1 Tax=Kaistia granuli RepID=UPI000362610D
transketolase central subunit
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:AID33827.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCN18_30_10_14_R2_B_scaffold_1269_4
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3008..3859)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367A47B
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:AID33828.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
transketolase domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1269_5
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3862..4641)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D7421
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEH85003.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_30_10_14_R2_B_scaffold_1269_6
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4982..5776)
DNA (795bp) protein (265aa)
garL; 5-keto-4-deoxy-D-glucarate aldolase GarL (EC:4.1.2.20)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D6D28
Putative aldolase {ECO:0000313|EMBL:EAS50843.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCN18_30_10_14_R2_B_scaffold_1269_7
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5773..6891)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A185F
D-3-phosphoglycerate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1269_8
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6885..8156)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003705949
mandelate racemase / muconate lactonizing enzyme
Tax=RBG_16_Chloroflexi_54_18_curated
SCN18_30_10_14_R2_B_scaffold_1269_9
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8186..9025)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360A244
sugar ABC transporter
Sugar ABC transporter {ECO:0000313|EMBL:ACM29844.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCN18_30_10_14_R2_B_scaffold_1269_10
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9022..9942)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C800B
sugar ABC transporter
Sugar ABC transporter {ECO:0000313|EMBL:AIB14456.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_1269_11
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10230..11543)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003744975
Uncharacterized protein {ECO:0000313|EMBL:ERI38907.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
family 1 extracellular solute-binding protein
SCN18_30_10_14_R2_B_scaffold_1269_12
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11677..12366)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D5D4D
GntR family transcriptional regulator {ECO:0000313|EMBL:KDN18077.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
GntR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_1269_13
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12451..13488
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F0568
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:CDX32863.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
SCN18_30_10_14_R2_B_scaffold_1269_14
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13714..14802)
DNA (1089bp) protein (363aa)
Malate dehydrogenase (EC:1.1.1.37)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C9C8F
Uncharacterized protein {ECO:0000313|EMBL:EWY38283.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCN18_30_10_14_R2_B_scaffold_1269_15
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15111..15911)
DNA (801bp) protein (267aa)
sgc region protein SgcQ n=1 Tax=Kaistia granuli RepID=UPI000373C4A5
Sgc region protein SgcQ {ECO:0000313|EMBL:ESZ30337.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
photosystem I assembly BtpA
SCN18_30_10_14_R2_B_scaffold_1269_16
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15952..16788)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371ECE2
DeoR family transcriptional regulator
Regulatory protein DeoR {ECO:0000313|EMBL:ADV11585.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R2_B_scaffold_1269_17
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17186..18316
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003601335
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADV11587.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R2_B_scaffold_1269_18
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18329..19126
DNA (798bp) protein (266aa)
ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI00036CF6CF
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADV11588.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R2_B_scaffold_1269_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19167..20441
DNA (1275bp) protein (425aa)
ABC transporter substrate-binding protein n=1 Tax=Kaistia granuli RepID=UPI0003744DE1
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADV11589.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R2_B_scaffold_1269_20
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20582..21472
DNA (891bp) protein (297aa)
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000373DBCC
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ30331.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
binding-protein-dependent transport system inner membrane protein
SCN18_30_10_14_R2_B_scaffold_1269_21
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21572..22516)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003756348
Threonine dehydratase {ECO:0000313|EMBL:ERK09517.1}; TaxID=1332069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. AS-PWVM4.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit
SCN18_30_10_14_R2_B_scaffold_1269_22
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22556..23401)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377BC60
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM30444.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
sugar ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_1269_23
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23403..24275)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003699FBC
ABC transporter permease {ECO:0000313|EMBL:KGM30723.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative UgpA, ABC-type sugar transport systems, permease component UgpA
SCN18_30_10_14_R2_B_scaffold_1269_24
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24341..25039)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000365007F
ABC transporter substrate-binding protein
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EIM77500.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
SCN18_30_10_14_R2_B_scaffold_1269_25
unknown

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25110..25244
DNA (135bp) protein (45aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1269_26
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25293..25685)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000365007F
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP73136.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative ABC-type sugar transport system, periplasmic component
SCN18_30_10_14_R2_B_scaffold_1269_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25968..26972)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035ED016
succinylglutamate desuccinylase/aspartoacylase protein
Succinylglutamate desuccinylase/aspartoacylase protein {ECO:0000313|EMBL:AGS24313.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCN18_30_10_14_R2_B_scaffold_1269_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27109..27849
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362E721
Uncharacterized protein {ECO:0000313|EMBL:KIL35489.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
beta-lactamase domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1269_29
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27876..28220)
DNA (345bp) protein (115aa)
N-acylmannosamine 1-dehydrogenase; Short=NAM-DH;; EC=1.1.1.233;; TaxID=240 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. (strain 141-8).;"
gluconate 5-dehydrogenase (EC:1.1.1.69)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E5B9F
Displaying 29 items

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