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SCN18_30_10_14_R2_B_scaffold_6222

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6222_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..610)
DNA (609bp) protein (203aa)
Carnitinyl-CoA dehydratase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0T8_9PROT
Carnitinyl-CoA dehydratase {ECO:0000313|EMBL:EHM00820.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
carnitinyl-CoA dehydratase
SCN18_30_10_14_R2_B_scaffold_6222_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(607..1764)
DNA (1158bp) protein (386aa)
Acyl-CoA dehydrogenase protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0T9_9PROT
Acyl-CoA dehydrogenase protein {ECO:0000313|EMBL:EHM00821.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6222_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1980..2387
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P256_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36667.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rhodanese-like domain-containing protein
SCN18_30_10_14_R2_B_scaffold_6222_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2535..3290
DNA (756bp) protein (252aa)
Transcriptional regulator n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QFI2_BORBO
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_30_10_14_R2_B_scaffold_6222_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3449..4111
DNA (663bp) protein (221aa)
Transcriptional regulator n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WE59_9BURK
bacterial regulatory s, gntR family protein
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AJY10138.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
SCN18_30_10_14_R2_B_scaffold_6222_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4111..5253
DNA (1143bp) protein (381aa)
L-alanine-DL-glutamate epimerase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WE56_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_30_10_14_R2_B_scaffold_6222_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5499..5996)
DNA (498bp) protein (166aa)
SCN18_30_10_14_R2_B_scaffold_6222_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6037..6885
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FAE039
Taurine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX28511.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_6222_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6870..7691
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310751F
Taurine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX54590.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter ATP-binding protein
SCN18_30_10_14_R2_B_scaffold_6222_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7711..8910
DNA (1200bp) protein (400aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J2LV05_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJL89233.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
NMT1/THI5 like domain-containing protein
SCN18_30_10_14_R2_B_scaffold_6222_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9097..9552)
DNA (456bp) protein (152aa)
PEBP family protein n=1 Tax=Rhizobium loti RepID=UPI000379CC9D
Phosphatidylethanolamine-binding family protein {ECO:0000313|EMBL:AID28245.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6222_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9597..10181)
DNA (585bp) protein (195aa)
peptide synthetase n=1 Tax=Martelella mediterranea RepID=UPI000360BCF8
peptide synthetase
Peptide synthetase {ECO:0000313|EMBL:AJY45003.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_30_10_14_R2_B_scaffold_6222_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10267..10875)
DNA (609bp) protein (203aa)
UPI0003CF8485 related cluster n=1 Tax=unknown RepID=UPI0003CF8485
Tungsten formylmethanofuran dehydrogenase subunit B {ECO:0000313|EMBL:ESY88648.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
SCN18_30_10_14_R2_B_scaffold_6222_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10863..11393)
DNA (531bp) protein (177aa)
UPI0003CF8485 related cluster n=1 Tax=unknown RepID=UPI0003CF8485
Tungsten formylmethanofuran dehydrogenase subunit B {ECO:0000313|EMBL:ESY88648.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
SCN18_30_10_14_R2_B_scaffold_6222_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11400..12146)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037A9600
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EHR50957.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
putative ABC transporter substrate-binding protein
Displaying 15 items

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