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SCN18_30_10_14_R3_B_scaffold_1494

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_1494_1
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1340)
DNA (1338bp) protein (446aa)
CoA-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L1_9BRAD
Succinyl-CoA synthetase subunit alpha {ECO:0000313|EMBL:CEG08422.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
CoA-binding protein
SCN18_30_10_14_R3_B_scaffold_1494_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1696..3000)
DNA (1305bp) protein (435aa)
Oxalate/formate antiporter n=2 Tax=Oligotropha carboxidovorans RepID=B6JE31_OLICO
oxalate/formate antiporter
Oxalate:formate antiporter {ECO:0000313|EMBL:AEI06225.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1494_3
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3769..5499
DNA (1731bp) protein (577aa)
oxc; oxalyl-CoA decarboxylase Oxc (EC:4.1.1.8)
Oxalyl-CoA decarboxylase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHU8_AFIFE
Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:EKS28641.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCN18_30_10_14_R3_B_scaffold_1494_4
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5592..6866
DNA (1275bp) protein (425aa)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO:0000256|HAMAP-Rule:MF_00742}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
frc; formyl-CoA transferase (EC:2.8.3.16)
Formyl-coenzyme A transferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L4_9BRAD
SCN18_30_10_14_R3_B_scaffold_1494_5
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7101..8429
DNA (1329bp) protein (443aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L5_9BRAD
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51612.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
extracellular ligand-binding receptor
SCN18_30_10_14_R3_B_scaffold_1494_6
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8566..9429
DNA (864bp) protein (288aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L6_9BRAD
Inner-membrane translocator {ECO:0000313|EMBL:EFI51613.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
inner-membrane translocator
SCN18_30_10_14_R3_B_scaffold_1494_7
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9426..10373
DNA (948bp) protein (316aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L7_9BRAD
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:CEG08415.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
inner-membrane translocator
SCN18_30_10_14_R3_B_scaffold_1494_8
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10370..11104
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHU4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28636.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ABC transporter
SCN18_30_10_14_R3_B_scaffold_1494_9
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11101..11835
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM73_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28635.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ABC transporter
SCN18_30_10_14_R3_B_scaffold_1494_10
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11878..12909
DNA (1032bp) protein (344aa)
dusA; tRNA-dihydrouridine synthase A (EC:1.-.-.-)
tRNA-dihydrouridine synthase A {ECO:0000313|EMBL:AEI06232.1}; EC=1.-.-.- {ECO:0000313|EMBL:AEI06232.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
tRNA-dihydrouridine synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JE24_OLICO
SCN18_30_10_14_R3_B_scaffold_1494_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12913..13425)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51627.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1494_12
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13454..13741)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N1_9BRAD
Putative Fe-S protein {ECO:0000313|EMBL:CEG08399.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1494_13
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13722..15290)
DNA (1569bp) protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRP2_9BRAD
signal transduction histidine kinase
SCN18_30_10_14_R3_B_scaffold_1494_14
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15516..16211)
DNA (696bp) protein (232aa)
MgtC family membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JE20_OLICO
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:AEI06236.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1494_15
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..17238)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM68_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28630.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
phosphate transporter
SCN18_30_10_14_R3_B_scaffold_1494_16
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17249..17890)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JE18_OLICO
phosphate transport regulator
Putative phosphate transport regulator {ECO:0000313|EMBL:AEI06238.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1494_17
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18174..18662
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQX8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28628.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
MRP ATP/GTP-binding protein
Displaying 17 items

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