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SCN18_30_10_14_R3_B_scaffold_1503

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_1503_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..918
DNA (918bp) protein (306aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002EE3E88
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EKS38689.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCN18_30_10_14_R3_B_scaffold_1503_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1463..2284)
DNA (822bp) protein (274aa)
iron permease FTR1 n=1 Tax=Afipia birgiae RepID=UPI0002E5A108
FTR1 family protein {ECO:0000313|EMBL:EKS38690.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1503_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2595..3695)
DNA (1101bp) protein (367aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Rule:MF_01665}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Heme A synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NBL3_AFIFE
cytochrome oxidase assembly
SCN18_30_10_14_R3_B_scaffold_1503_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3803..4021
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9U9_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG07822.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCN18_30_10_14_R3_B_scaffold_1503_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4144..5334
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63252.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R3_B_scaffold_1503_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5500..7650)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGM2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38695.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
lipopolysaccharide biosynthesis protein
SCN18_30_10_14_R3_B_scaffold_1503_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..8989
DNA (1131bp) protein (377aa)
glycosyl transferase n=1 Tax=Afipia birgiae RepID=UPI0002DF1431
Glycosyltransferase {ECO:0000313|EMBL:EGP07224.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
group 1 glycosyl transferase
SCN18_30_10_14_R3_B_scaffold_1503_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9127..10680
DNA (1554bp) protein (518aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6Q0_9BRAD
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EKS38252.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sugar transferase
SCN18_30_10_14_R3_B_scaffold_1503_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10697..12004
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9V4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50248.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1503_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12021..12263)
DNA (243bp) protein (81aa)
pilus assembly protein PilZ n=1 Tax=Afipia birgiae RepID=UPI00031C7785
Uncharacterized protein {ECO:0000313|EMBL:EKS36256.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
type IV pilus assembly PilZ
SCN18_30_10_14_R3_B_scaffold_1503_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12323..12649)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P851_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06986.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1503_trna_1
unknown

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13010..13084
DNA (75bp)
transferRNA Pro
SCN18_30_10_14_R3_B_scaffold_1503_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13107..13427
DNA (321bp) protein (107aa)
UPF0060 membrane protein Nham_2004 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y2004_NITHX
UPF0060 membrane protein Nham_2004 {ECO:0000255|HAMAP-Rule:MF_00010}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1503_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13612..14484)
DNA (873bp) protein (291aa)
Putative transcriptional regulator protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGR9_OLICO
regulatory protein MerR
Putative transcriptional regulator protein {ECO:0000313|EMBL:AEI06843.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1503_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..14991)
DNA (330bp) protein (110aa)
Integration host factor subunit alpha n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB46_9BRAD
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ihfA; integration host factor subunit alpha
SCN18_30_10_14_R3_B_scaffold_1503_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15125..16102)
DNA (978bp) protein (326aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9V5_9BRAD
SCN18_30_10_14_R3_B_scaffold_1503_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16099..17160)
DNA (1062bp) protein (354aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
Phosphate acyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9W1_9BRAD
plsX; phosphate acyltransferase PlsX
SCN18_30_10_14_R3_B_scaffold_1503_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17329..17919)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9W2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50256.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1503_18
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17934..18473)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW87_BRASO
basic FGF-repressed Zic binding protein
Uncharacterized protein {ECO:0000313|EMBL:CAL78163.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Displaying 19 items

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