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SCN18_30_10_14_R3_B_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_273_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..442
DNA (441bp) protein (147aa)
Flagellar motor switch protein FliM n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGK4_AFIFE
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
fliM; flagellar motor switch protein FliM
SCN18_30_10_14_R3_B_scaffold_273_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

442..873
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBI1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07283.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_273_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

870..1655
DNA (786bp) protein (262aa)
flagellar protein FlbB n=1 Tax=Afipia birgiae RepID=UPI0002DCC426
Uncharacterized protein {ECO:0000313|EMBL:EKS36302.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_273_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1748..2725)
DNA (978bp) protein (326aa)
MFS transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXI9_9BURK
MFS transporter {ECO:0000313|EMBL:ETF04058.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
bug; ABC transporter substrate-binding protein
SCN18_30_10_14_R3_B_scaffold_273_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2758..4155)
DNA (1398bp) protein (466aa)
Glucose-inhibited division protein A id=3931052 bin=GWC2_Syntrophus__56_31 species=Nitratireductor pacificus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
glucose-inhibited division protein A
Tax=GWC2_Syntrophus_56_31_curated
SCN18_30_10_14_R3_B_scaffold_273_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4303..5142
DNA (840bp) protein (280aa)
Putative IclR-family regulatory protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWG6_AROAE
iclR; IclR family regulatory protein
Putative IclR-family regulatory protein {ECO:0000313|EMBL:CAI10598.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCN18_30_10_14_R3_B_scaffold_273_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5343..9032
DNA (3690bp) protein (1230aa)
Tetratricopeptide TPR_4 protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2D6_9BRAD
Tetratricopeptide TPR_4 protein {ECO:0000313|EMBL:EFI52116.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_273_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9084..9836)
DNA (753bp) protein (251aa)
flagellar biosynthesis protein FliP n=1 Tax=Afipia birgiae RepID=UPI000302AB4B
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47651.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
fliP; flagellar biosynthesis protein FliP
SCN18_30_10_14_R3_B_scaffold_273_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..10837)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBI5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07279.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_273_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11229..11633
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P590_9BRAD
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
flgB; flagellar basal body rod protein FlgB
SCN18_30_10_14_R3_B_scaffold_273_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11660..12082
DNA (423bp) protein (141aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P140_9BRAD
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgC; flagellar basal-body rod protein FlgC
SCN18_30_10_14_R3_B_scaffold_273_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12099..12422
DNA (324bp) protein (108aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQ89_9BRAD
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
fliE; flagellar hook-basal body protein FliE
SCN18_30_10_14_R3_B_scaffold_273_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12475..12738
DNA (264bp) protein (88aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMW4_AFIFE
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EKS27568.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
flagellar biosynthesis protein FliQ
SCN18_30_10_14_R3_B_scaffold_273_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12758..13534
DNA (777bp) protein (259aa)
flagellar biosynthesis protein FliR n=1 Tax=Afipia birgiae RepID=UPI00030536F1
fliR; flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCN18_30_10_14_R3_B_scaffold_273_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13537..14607
DNA (1071bp) protein (357aa)
Flagellar biosynthetic protein FlhB n=2 Tax=Oligotropha carboxidovorans RepID=B6JBJ1_OLICO
flhB; flagellar biosynthetic protein FlhB
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:AEI07273.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_273_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14741..17263
DNA (2523bp) protein (841aa)
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P137_9BRAD
PAS domain S-box protein {ECO:0000313|EMBL:EKS36292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
multi-sensor hybrid histidine kinase
SCN18_30_10_14_R3_B_scaffold_273_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17395..18363
DNA (969bp) protein (323aa)
Import inner membrane translocase, subunit Tim44 n=2 Tax=Oligotropha carboxidovorans RepID=B6JBJ3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07271.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_273_18
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18495..19202
DNA (708bp) protein (236aa)
Glutathione S-transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2C5_9BRAD
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EFI52105.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glutathione S-transferase
SCN18_30_10_14_R3_B_scaffold_273_19
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19278..19679
DNA (402bp) protein (134aa)
Cupin region n=2 Tax=Oligotropha carboxidovorans RepID=B6JBJ5_OLICO
cupin region
Uncharacterized protein {ECO:0000313|EMBL:AEI07269.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_273_20
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19810..20172
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2C3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07436.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_273_21
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20326..20685)
DNA (360bp) protein (120aa)
SCN18_30_10_14_R3_B_scaffold_273_22
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20799..21272)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2C1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52101.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_273_23
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21511..23163
DNA (1653bp) protein (551aa)
fumarate hydratase (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2C0_9BRAD
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:EFI52100.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCN18_30_10_14_R3_B_scaffold_273_24
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23375..23788
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2B6_9BRAD
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFI52096.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
protein PhnB
SCN18_30_10_14_R3_B_scaffold_273_25
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23821..24009
DNA (189bp) protein (63aa)
SCN18_30_10_14_R3_B_scaffold_273_26
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24023..25228
DNA (1206bp) protein (402aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2B3_9BRAD
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EFI52093.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
drug transporter protein, Bcr/CflA family
SCN18_30_10_14_R3_B_scaffold_273_27
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25415..26089
DNA (675bp) protein (225aa)
methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P553_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37697.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCN18_30_10_14_R3_B_scaffold_273_28
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26155..26817
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TRQ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE09143.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_273_29
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26859..28076)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NAE8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27592.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_273_30
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28364..28645
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6B8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36254.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 1-30 of 96 in total

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