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SCN18_30_10_14_R3_P_scaffold_59

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Displaying items 1-30 of 258 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_59_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(36..200)
DNA (165bp) protein (55aa)
transposase IS3 n=1 Tax=Sphingomonas wittichii RepID=UPI0002DC0774
Transposase {ECO:0000313|EMBL:KKC31741.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
tnp; transposase
SCN18_30_10_14_R3_P_scaffold_59_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

434..1456
DNA (1023bp) protein (341aa)
Iron ABC transporter substrate-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JE9_SYMTH
iron ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_30_10_14_R3_P_scaffold_59_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1461..3125
DNA (1665bp) protein (555aa)
Fe3+ ABC superfamily ATP binding cassette transporter, permease protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EDP3_9ACTO
ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_30_10_14_R3_P_scaffold_59_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3198..4295
DNA (1098bp) protein (366aa)
ABC transporter related protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R974_SPISS
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_30_10_14_R3_P_scaffold_59_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4320..5552
DNA (1233bp) protein (411aa)
Phosphopentomutase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S06_SYMTH
mutase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_30_10_14_R3_P_scaffold_59_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5710..7035
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PH92_RHIML
hypothetical protein
SAF domain-containing protein {ECO:0000313|EMBL:AJC80861.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCN18_30_10_14_R3_P_scaffold_59_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7039..8070
DNA (1032bp) protein (344aa)
acoA1; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha (EC:1.1.1.-)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P888_RHIML
Acetoin dehydrogenase TPP-dependent alpha chain {ECO:0000313|EMBL:ACP23387.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_30_10_14_R3_P_scaffold_59_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8070..9068
DNA (999bp) protein (333aa)
pdhB-2; pyruvate dehydrogenase subunit beta 2 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PLQ8_RHIML
Pyruvate dehydrogenase {ECO:0000313|EMBL:EZQ12624.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCN18_30_10_14_R3_P_scaffold_59_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9071..10399
DNA (1329bp) protein (443aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Rhizobium loti RepID=UPI00037AB493
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
SCN18_30_10_14_R3_P_scaffold_59_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10475..11455)
DNA (981bp) protein (327aa)
Transcriptional regulator LsrR n=1 Tax=Nitratireductor indicus C115 RepID=K2P1M5_9RHIZ
Sugar-binding protein {ECO:0000313|EMBL:EZQ17409.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_59_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11859..12803
DNA (945bp) protein (315aa)
Ribokinase n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z1W8_9RHOB
Ribokinase {ECO:0000313|EMBL:GAD55335.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
pfkB-type carbohydrate kinase family protein
SCN18_30_10_14_R3_P_scaffold_59_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12889..14415)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE75_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66318.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_30_10_14_R3_P_scaffold_59_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14408..18049)
DNA (3642bp) protein (1214aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE74_XANP2
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ABS66317.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
peptidase S8/S53 subtilisin kexin sedolisin
SCN18_30_10_14_R3_P_scaffold_59_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18448..19239)
DNA (792bp) protein (264aa)
UPF0317 protein HMPREF0004_3617 n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XDS0_9BURK
UPF0317 protein HMPREF0004_3617 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
FIG00431972: hypothetical protein
SCN18_30_10_14_R3_P_scaffold_59_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19263..20618)
DNA (1356bp) protein (452aa)
amidase (EC:3.5.1.4)
Amidase n=31 Tax=Bordetella RepID=F4LBG6_BORPC
Putative amidase {ECO:0000313|EMBL:CAE42157.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251).;"
SCN18_30_10_14_R3_P_scaffold_59_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20623..21309)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003037C31
Uncharacterized protein {ECO:0000313|EMBL:EGP43892.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_59_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21350..22633)
DNA (1284bp) protein (428aa)
TRAP transporter subunit DctM n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F3Q9_9BURK
TRAP transporter subunit DctM {ECO:0000313|EMBL:EHK67114.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
TRAP dicarboxylate transporter, DctM subunit,unknown substrate 7
SCN18_30_10_14_R3_P_scaffold_59_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22630..23250)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XZ27_ALCXX
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFG67565.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
TRAP dicarboxylate transporter, DctQ subunit,unknown substrate 7
SCN18_30_10_14_R3_P_scaffold_59_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23317..24357)
DNA (1041bp) protein (347aa)
Putative exported protein (TRAP-type transport system, periplasmic component) n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ILD5_BORPD
exported protein (TRAP-type transport system, periplasmic component)
Putative exported protein (TRAP-type transport system, periplasmic component) {ECO:0000313|EMBL:CAP42571.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_30_10_14_R3_P_scaffold_59_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24404..25567)
DNA (1164bp) protein (388aa)
Peptidase, M24 family {ECO:0000313|EMBL:EEX48948.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEX48948.1};; TaxID=645512 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi E3_33 E1.;"
Xaa-Pro aminopeptidase n=3 Tax=Jonquetella RepID=H0UIS5_9BACT
peptidase
SCN18_30_10_14_R3_P_scaffold_59_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25791..26699)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000376B451
LysR family transcriptional regulator {ECO:0000313|EMBL:KGD98308.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
putative LysR-family transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_59_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26825..28222)
DNA (1398bp) protein (466aa)
Sugar transporter n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDI4_XANP2
Major facilitator superfamily transporter {ECO:0000313|EMBL:KFC69270.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sugar transporter
SCN18_30_10_14_R3_P_scaffold_59_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28310..29647
DNA (1338bp) protein (446aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDI3_XANP2
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:KFC69271.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCN18_30_10_14_R3_P_scaffold_59_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29679..31055
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035EE8F6
MFS transporter, metabolite:H+ symporter {ECO:0000313|EMBL:KFC69272.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sugar transporter
SCN18_30_10_14_R3_P_scaffold_59_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31052..31420
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDI1_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KFC69273.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_59_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31407..33035
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000362E99B
Putative oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:KFC69276.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose-methanol-choline oxidoreductase
SCN18_30_10_14_R3_P_scaffold_59_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33086..34270
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XZA0_9RHIZ
Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA {ECO:0000313|EMBL:KFC69274.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase m23
SCN18_30_10_14_R3_P_scaffold_59_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34386..35429)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000367B742
Uncharacterized protein {ECO:0000313|EMBL:KFC64943.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_59_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35890..36933
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312B86B
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ACB26540.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCN18_30_10_14_R3_P_scaffold_59_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37028..37741)
DNA (714bp) protein (238aa)
Periplasmic nitrate (Or nitrite) reductase c-type cytochrome, NapC/NirT family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7M8_STAND
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
periplasmic nitrate (or nitrite) reductase c-type cytochrome
Displaying items 1-30 of 258 in total

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