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SCN18_30_10_14_R3_P_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_70_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..758
DNA (756bp) protein (252aa)
Uncharacterized protein y4qI n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Y4QI_RHISN
transposase
Uncharacterized protein y4qI; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_30_10_14_R3_P_scaffold_70_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(769..1212)
DNA (444bp) protein (148aa)
Integrase catalytic region n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZX5_POLGS
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADZ71013.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_30_10_14_R3_P_scaffold_70_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1209..1484)
DNA (276bp) protein (92aa)
ISEhe3 transposase A n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZX4_POLGS
ISEhe3 transposase A
ISEhe3 transposase A {ECO:0000313|EMBL:ADZ70700.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_30_10_14_R3_P_scaffold_70_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1801..3993
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036700C3
Uncharacterized protein {ECO:0000313|EMBL:KJZ46096.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
SCN18_30_10_14_R3_P_scaffold_70_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4149..4529)
DNA (381bp) protein (127aa)
integrase n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037CF9CA
Integrase catalytic region {ECO:0000313|EMBL:EHP84118.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
integrase catalytic subunit
SCN18_30_10_14_R3_P_scaffold_70_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5053..6222
DNA (1170bp) protein (390aa)
Phage integrase n=2 Tax=Oligotropha carboxidovorans RepID=B6JEM3_OLICO
phage integrase
Phage integrase {ECO:0000313|EMBL:AEI06569.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_P_scaffold_70_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6285..6602
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003742232
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM57196.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCN18_30_10_14_R3_P_scaffold_70_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6933..7079)
DNA (147bp) protein (49aa)
SCN18_30_10_14_R3_P_scaffold_70_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7213..7869)
DNA (657bp) protein (219aa)
SCN18_30_10_14_R3_P_scaffold_70_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7866..9584)
DNA (1719bp) protein (573aa)
Phage tape measure protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KHR6_METEX
Phage tape measure protein {ECO:0000313|EMBL:EHP92944.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_70_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9588..11099)
DNA (1512bp) protein (504aa)
terminase n=1 Tax=Xanthobacteraceae RepID=UPI0003714045
Uncharacterized protein {ECO:0000313|EMBL:KJC53464.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Phage terminase-like protein
SCN18_30_10_14_R3_P_scaffold_70_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11152..11556)
DNA (405bp) protein (135aa)
UPI0003D0551E related cluster n=1 Tax=unknown RepID=UPI0003D0551E
Terminase {ECO:0000313|EMBL:ESZ76288.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
phage terminase, small subunit , P27
SCN18_30_10_14_R3_P_scaffold_70_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11553..11873)
DNA (321bp) protein (107aa)
Bacteriophage head-tail adaptor n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C913_RHILT
phage head-tail adapter protein
Bacteriophage head-tail adaptor {ECO:0000313|EMBL:EJC75560.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCN18_30_10_14_R3_P_scaffold_70_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11870..12238)
DNA (369bp) protein (123aa)
Phage protein, HK97 gp10 family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JF41_HYPSM
Phage protein, HK97 gp10 family
Phage protein, HK97 gp10 family {ECO:0000313|EMBL:CCB65396.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_30_10_14_R3_P_scaffold_70_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12228..12782)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003731880
Uncharacterized protein {ECO:0000313|EMBL:EZP57434.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
phage protein
SCN18_30_10_14_R3_P_scaffold_70_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12757..13104)
DNA (348bp) protein (116aa)
SCN18_30_10_14_R3_P_scaffold_70_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13673..14092)
DNA (420bp) protein (140aa)
Gene transfer agent n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U945_SINMW
Gene transfer agent {ECO:0000313|EMBL:KFL31481.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
gene transfer agent
SCN18_30_10_14_R3_P_scaffold_70_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14280..14672)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PGD0_RHOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN75396.1}; Flags: Precursor;; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCN18_30_10_14_R3_P_scaffold_70_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14728..16335)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JF31_HYPSM
Phage prohead protease, HK97 family/phage major capsid protein, HK97 family {ECO:0000313|EMBL:AKI01427.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_70_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16328..16786)
DNA (459bp) protein (153aa)
SCN18_30_10_14_R3_P_scaffold_70_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16779..17972)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003790E8C
Uncharacterized protein {ECO:0000313|EMBL:KJC53469.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
putative head portal protein, HK97 family
SCN18_30_10_14_R3_P_scaffold_70_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17972..18391)
DNA (420bp) protein (140aa)
UPI0003D00F73 related cluster n=1 Tax=unknown RepID=UPI0003D00F73
Uncharacterized protein {ECO:0000313|EMBL:ESZ76500.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
SCN18_30_10_14_R3_P_scaffold_70_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18908..19945)
DNA (1038bp) protein (346aa)
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_70_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19942..21201)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PUG2_RHIE6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE92043.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCN18_30_10_14_R3_P_scaffold_70_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21182..21448)
DNA (267bp) protein (89aa)
SCN18_30_10_14_R3_P_scaffold_70_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21510..21872)
DNA (363bp) protein (121aa)
SCN18_30_10_14_R3_P_scaffold_70_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21869..22096)
DNA (228bp) protein (76aa)
Putative phage transcriptional regulator AlpA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIG3_RHITR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF83676.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCN18_30_10_14_R3_P_scaffold_70_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22176..22292)
DNA (117bp) protein (39aa)
SCN18_30_10_14_R3_P_scaffold_70_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22289..23110)
DNA (822bp) protein (274aa)
SCN18_30_10_14_R3_P_scaffold_70_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23258..23842
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PXC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM76270.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
Displaying items 1-30 of 236 in total

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