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SCN18_30_10_14_R3_P_scaffold_286

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Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_286_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(117..302)
DNA (186bp) protein (62aa)
Integrase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QX62_RALPI
integrase
Integrase {ECO:0000313|EMBL:AGW95509.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCN18_30_10_14_R3_P_scaffold_286_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277..858)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003818DC4
Transposase {ECO:0000313|EMBL:AJW29481.1}; TaxID=1628059 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;"
integrase catalytic subunit
SCN18_30_10_14_R3_P_scaffold_286_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(855..974)
DNA (120bp) protein (40aa)
putative transposase orfB for insertion sequence element
SCN18_30_10_14_R3_P_scaffold_286_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(971..1285)
DNA (315bp) protein (105aa)
transposase n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036FD191
Uncharacterized protein {ECO:0000313|EMBL:EAR23282.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
transposase IS3/IS911 family protein
SCN18_30_10_14_R3_P_scaffold_286_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1373..1996
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037DD5F4
L-sorbosone dehydrogenase {ECO:0000313|EMBL:KFC69394.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
L-sorbosone dehydrogenase
SCN18_30_10_14_R3_P_scaffold_286_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..3653
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
Sensory box histidine kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LB39_9RHOB
two component sensor kinase
SCN18_30_10_14_R3_P_scaffold_286_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3650..4093
DNA (444bp) protein (148aa)
chemotaxis protein CheY n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037E0EDA
Chemotaxis protein CheY {ECO:0000313|EMBL:KKC34709.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Response regulator receiver protein
SCN18_30_10_14_R3_P_scaffold_286_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4116..5159
DNA (1044bp) protein (348aa)
CheY-like receiver n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFP6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KHJ53199.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
chemotaxis protein CheY
SCN18_30_10_14_R3_P_scaffold_286_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5522..6259
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI000367CE83
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KFG67374.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Crp/Fnr family transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_286_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6302..6529
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00036F1C97
Wenxma_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70791.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
SCN18_30_10_14_R3_P_scaffold_286_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6558..7745)
DNA (1188bp) protein (396aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3J6_9RHIZ
Putative ribonuclease BN {ECO:0000313|EMBL:KFC64787.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ribonuclease BN
SCN18_30_10_14_R3_P_scaffold_286_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8084..8341)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAP1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EZQ15009.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_286_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8911..9243)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC69399.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_30_10_14_R3_P_scaffold_286_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9240..11792)
DNA (2553bp) protein (851aa)
Cytochrome-c oxidase {ECO:0000313|EMBL:KFC69398.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KFC69398.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ctaD2; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Heme/copper-type cytochrome/quinol oxidase, subunit 1 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVT2_9RHIZ
SCN18_30_10_14_R3_P_scaffold_286_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11789..12772)
DNA (984bp) protein (328aa)
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:KFC69397.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KFC69397.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Cytochrome c oxidase, subunit II n=5 Tax=Rhizobium meliloti RepID=F6E8A0_SINMK
putative cytochrome c oxidase chain II protein
SCN18_30_10_14_R3_P_scaffold_286_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12769..13917)
DNA (1149bp) protein (383aa)
Cytochrome c class I protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q4D3_METSZ
Transcription-repair coupling factor (Superfamily II helicase) {ECO:0000313|EMBL:KFC69396.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cytochrome c class I protein
SCN18_30_10_14_R3_P_scaffold_286_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13895..14542)
DNA (648bp) protein (216aa)
Cytochrome c oxidase caa3-type assembly factor CtaG-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQ04_9RHIZ
Membrane protein-like protein {ECO:0000313|EMBL:KFC69395.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
membrane protein
SCN18_30_10_14_R3_P_scaffold_286_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14668..14913)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B703DD
Uncharacterized protein {ECO:0000313|EMBL:KFC75005.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_30_10_14_R3_P_scaffold_286_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15955..16248)
DNA (294bp) protein (98aa)
UPI0003CE99EB related cluster n=1 Tax=unknown RepID=UPI0003CE99EB
Glutathione synthetase {ECO:0000313|EMBL:ESY61993.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_286_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16417..17406)
DNA (990bp) protein (330aa)
Signal transduction protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I4F8_AZOC5
signal transduction protein
Signal transduction protein {ECO:0000313|EMBL:BAF87724.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_30_10_14_R3_P_scaffold_286_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17603..18163)
DNA (561bp) protein (187aa)
Peptidase C56, PfpI n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISJ7_RHOP2
peptidase C56, PfpI
Peptidase C56, PfpI {ECO:0000313|EMBL:ABD08813.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_30_10_14_R3_P_scaffold_286_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18236..18763)
DNA (528bp) protein (176aa)
Double-stranded beta helix domain protein n=1 Tax=Pseudomonas sp. GM30 RepID=J3FQ80_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KFC64652.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Twin-arginine translocation pathway signal and cupin region containing protein
SCN18_30_10_14_R3_P_scaffold_286_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18816..19352)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q851_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC69292.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_286_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19379..19663)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Agrobacterium RepID=Q7D2Y2_AGRT5
Uncharacterized protein {ECO:0000313|EMBL:KFC69291.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_286_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19938..20333
DNA (396bp) protein (132aa)
PRC-barrel domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LS41_METRJ
PRC-barrel domain protein {ECO:0000313|EMBL:KFC63640.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PRC-barrel domain-containing protein
SCN18_30_10_14_R3_P_scaffold_286_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20741..22816
DNA (2076bp) protein (692aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
catalase (EC:1.11.1.6)
catalase n=1 Tax=Methylopila sp. M107 RepID=UPI00037806BC
SCN18_30_10_14_R3_P_scaffold_286_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22980..23234
DNA (255bp) protein (85aa)
SCN18_30_10_14_R3_P_scaffold_286_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23282..23500
DNA (219bp) protein (73aa)
SCN18_30_10_14_R3_P_scaffold_286_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23641..23829
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC65762.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_30_10_14_R3_P_scaffold_286_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24047..24823)
DNA (777bp) protein (259aa)
Transglutaminase-like superfamily protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDC7_9CAUL
Transglutaminase {ECO:0000313|EMBL:KIZ41279.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transglutaminase
Displaying items 1-30 of 94 in total

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