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SCN18_30_10_14_R4_B_scaffold_18

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Displaying items 1-30 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_B_scaffold_18_1
scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, Plasmid-like

Not on your lists

comp(144..893)
DNA (750bp) protein (250aa)
modification methylase (EC:2.1.1.37)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B63B2A
Tax=BJP_IG2157_Actinomycetales_63_19
SCN18_30_10_14_R4_B_scaffold_18_2
scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, Plasmid-like

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1133..4690
DNA (3558bp) protein (1186aa)
TrwC relaxase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E306_9MICO
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AHI02833.1}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 44353.;"
SCN18_30_10_14_R4_B_scaffold_18_3
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4695..5948)
DNA (1254bp) protein (418aa)
transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3AFBA
Predicted transcriptional regulator with HTH domain protein {ECO:0000313|EMBL:CEI48380.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
transcriptional regulator
SCN18_30_10_14_R4_B_scaffold_18_4
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(6018..7013)
DNA (996bp) protein (332aa)
Putative smf family protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSN7_ARTAR
DNA processing factor {ECO:0000313|EMBL:CEI48379.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
smf family protein
SCN18_30_10_14_R4_B_scaffold_18_5
scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, scnpilot_dereplicated_Plasmid_Micrococcales_1, Plasmid-like

Not on your lists

7218..7592
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029AE8D1
Uncharacterized protein {ECO:0000313|EMBL:CEI48378.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_18_6
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7592..8011
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI98952.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
SCN18_30_10_14_R4_B_scaffold_18_7
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8468..8758
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000378602B
Uncharacterized protein {ECO:0000313|EMBL:EZP26766.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_18_8
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8839..9585
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000382BD89
Preprotein translocase subunit YidC {ECO:0000313|EMBL:EZP26767.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
preprotein translocase subunit YidC
SCN18_30_10_14_R4_B_scaffold_18_9
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9618..10262)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5U8_LEIAQ
PPE-repeat proteins {ECO:0000313|EMBL:CDK00019.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
PPE-repeat proteins
SCN18_30_10_14_R4_B_scaffold_18_10
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10259..10840)
DNA (582bp) protein (194aa)
amidase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B129F
Isochorismatase hydrolase {ECO:0000313|EMBL:EZP25197.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
amidase
SCN18_30_10_14_R4_B_scaffold_18_11
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10837..13101)
DNA (2265bp) protein (755aa)
MMPL domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E621_9MICO
MMPL domain protein {ECO:0000313|EMBL:EIC07618.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
drug exporters of the RND superfamily
SCN18_30_10_14_R4_B_scaffold_18_12
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13122..13544)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A978_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52380.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
leucyl-tRNA synthetase
SCN18_30_10_14_R4_B_scaffold_18_13
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13712..13885
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034D2439
Uncharacterized protein {ECO:0000313|EMBL:KJL37106.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_18_trna_8
unknown

Not on your lists

comp(13936..14008)
DNA (73bp)
transferRNA Thr
SCN18_30_10_14_R4_B_scaffold_18_14
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14262..15170
DNA (909bp) protein (303aa)
NLPA lipoprotein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E623_9MICO
NLPA lipoprotein {ECO:0000313|EMBL:EIC07620.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
methionine ABC transporter substrate-binding protein
SCN18_30_10_14_R4_B_scaffold_18_15
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15238..16290
DNA (1053bp) protein (351aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002F8A738
putative metal ABC transporter ATP-binding protein
SCN18_30_10_14_R4_B_scaffold_18_16
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16283..16942
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7D8_9MICO
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXJ52318.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
amino acid transport protein
SCN18_30_10_14_R4_B_scaffold_18_17
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16981..18543)
DNA (1563bp) protein (521aa)
TAP domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E626_9MICO
TAP domain protein {ECO:0000313|EMBL:EIC07623.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase or acyltransferase
SCN18_30_10_14_R4_B_scaffold_18_18
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18540..19694)
DNA (1155bp) protein (385aa)
ATPase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E627_9MICO
ATPase {ECO:0000313|EMBL:EIC07624.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ATPase
SCN18_30_10_14_R4_B_scaffold_18_19
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19750..20370)
DNA (621bp) protein (207aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Thymidylate kinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E628_9MICO
thymidylate kinase
SCN18_30_10_14_R4_B_scaffold_18_20
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(20367..23177)
DNA (2811bp) protein (937aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
DNA topoisomerase 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E629_9MICO
topA; topoisomerase IA
SCN18_30_10_14_R4_B_scaffold_18_21
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23751..24548)
DNA (798bp) protein (266aa)
Putative TetR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BAV3_RHOOB
TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAH52806.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCN18_30_10_14_R4_B_scaffold_18_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24655..24945
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YKI1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD33474.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_18_23
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25008..26261)
DNA (1254bp) protein (418aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK30_CELFN
integral membrane sensor signal transduction histidine kinase
SCN18_30_10_14_R4_B_scaffold_18_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26258..26917)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K5N1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75734.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
cutR; two-component system regulatory protein
SCN18_30_10_14_R4_B_scaffold_18_25
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27077..27721
DNA (645bp) protein (215aa)
Exoribonuclease R n=1 Tax=Microbacterium sp. TS-1 RepID=U2X7R2_9MICO
Exoribonuclease R {ECO:0000313|EMBL:GAD33471.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_18_26
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27718..28779
DNA (1062bp) protein (354aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJX7_9MICO
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:GAD33470.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_18_27
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28745..29485
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YKH7_9MICO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAD33469.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ABC transporter ATP-binding protein
SCN18_30_10_14_R4_B_scaffold_18_28
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29448..30539
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI00034AFCB5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42152.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCN18_30_10_14_R4_B_scaffold_18_29
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30536..31441
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A258_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10578.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Displaying items 1-30 of 427 in total

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