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SCN18_30_10_14_R4_P_scaffold_2141

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_2141_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3..3512
DNA (3510bp) protein (1170aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00037593C2
Glycosyl transferase family 2 {ECO:0000313|EMBL:GAK56593.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
glycosyl transferase family protein
SCN18_30_10_14_R4_P_scaffold_2141_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3509..4279
DNA (771bp) protein (257aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.25 3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ABI63099.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ABI63099.1};; EC=3.1.3.7 {ECO:0000313|EMBL:ABI63099.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQ03_GRABC
SCN18_30_10_14_R4_P_scaffold_2141_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4491..5207)
DNA (717bp) protein (239aa)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EFH10257.1}; EC=3.7.1.2 {ECO:0000313|EMBL:EFH10257.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Demethylmenaquinone methyltransferase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RR10_9PROT
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_2141_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5233..6999)
DNA (1767bp) protein (589aa)
IlvD protein {ECO:0000313|EMBL:BAQ43719.1}; EC=4.2.1.9 {ECO:0000313|EMBL:BAQ43719.1};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Roseomonas sp. B5 RepID=UPI000314D1A5
SCN18_30_10_14_R4_P_scaffold_2141_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7088..7903
DNA (816bp) protein (272aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL44_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM24686.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GntR family transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_2141_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7955..9187)
DNA (1233bp) protein (411aa)
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B3B6C8
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KGY25003.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCN18_30_10_14_R4_P_scaffold_2141_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9549..10304)
DNA (756bp) protein (252aa)
cobyrinic acid a,c-diamide synthase (EC:2.7.10.1)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RM42_9PROT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCN18_30_10_14_R4_P_scaffold_2141_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10294..11457)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000307A323
GTP-binding signal recognition particle
GTP-binding signal recognition particle SRP54, G-domain protein {ECO:0000313|EMBL:KDM67872.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCN18_30_10_14_R4_P_scaffold_2141_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11698..12363)
DNA (666bp) protein (222aa)
FlhA n=1 Tax=Acidiphilium sp. PM RepID=F7S316_9PROT
flhA; flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KDM67873.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCN18_30_10_14_R4_P_scaffold_2141_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12321..13730)
DNA (1410bp) protein (470aa)
flagellar biosynthesis protein FlhA n=1 Tax=Gluconobacter frateurii RepID=UPI00029B1ED2
protein FlhA
FlhA {ECO:0000313|EMBL:AFW01525.1}; TaxID=1224746 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans H24.;"
SCN18_30_10_14_R4_P_scaffold_2141_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13736..15250)
DNA (1515bp) protein (505aa)
Transcriptional regulatory protein FlbD (LafK) n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRY6_RHOCS
flbD; transcriptional regulatory protein FlbD (LafK)
Transcriptional regulatory protein FlbD (LafK) {ECO:0000313|EMBL:ACI98222.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_30_10_14_R4_P_scaffold_2141_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15282..15602)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A2367
Flagellar motor switch protein FliN {ECO:0000313|EMBL:GAN78029.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fliN; Flagellar motor switch protein FliN
SCN18_30_10_14_R4_P_scaffold_2141_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15592..16476)
DNA (885bp) protein (295aa)
Flagellar assembly protein H n=2 Tax=Rhodospirillum rubrum RepID=G2T9K1_RHORU
fliH; flagellar assembly protein H
Uncharacterized protein {ECO:0000313|EMBL:ABC21347.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCN18_30_10_14_R4_P_scaffold_2141_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16498..17520)
DNA (1023bp) protein (341aa)
flagellar motor switch protein FliG n=1 Tax=Elioraea tepidiphila RepID=UPI00036AE7E4
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fliG; Flagellar motor switch protein fliG
SCN18_30_10_14_R4_P_scaffold_2141_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17513..19216)
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D8F8B
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
fliF; flagellar MS-ring protein
SCN18_30_10_14_R4_P_scaffold_2141_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19412..20182)
DNA (771bp) protein (257aa)
Two component transcriptional regulator n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YYA6_9ALTE
two-component transcriptional regulator, winged helix family
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCN18_30_10_14_R4_P_scaffold_2141_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20289..22139
DNA (1851bp) protein (617aa)
Putative PAS/PAC sensor protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MW88_9CYAN
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_2141_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22085..22867
DNA (783bp) protein (261aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXE0_9GAMM
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_2141_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23099..23677)
DNA (579bp) protein (193aa)
Putative lipoprotein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3T1_ACIMA
putative lipoprotein
Rare lipoprotein A {ECO:0000313|EMBL:EGO96228.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R4_P_scaffold_2141_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24009..24227
DNA (219bp) protein (73aa)
Putative Wzy family polymerase, exosortase system type 1 associated n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQB7_PHAMO
Putative Wzy family polymerase, exosortase system type 1 associated {ECO:0000313|EMBL:CCG40555.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
SCN18_30_10_14_R4_P_scaffold_2141_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24254..25381
DNA (1128bp) protein (376aa)
Putative Wzy family polymerase, exosortase system type 1 associated n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQB7_PHAMO
Putative Wzy family polymerase, exosortase system type 1 associated {ECO:0000313|EMBL:CCG40555.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
polymerase
Displaying 21 items

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