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SCN18_30_10_14_R4_P_scaffold_1280

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1280_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..866)
DNA (864bp) protein (288aa)
Cellulose synthase catalytic subunit [UDP-forming] n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I3J4_GLUXN
cellulose synthase catalytic subunit
Cellulose synthase catalytic subunit [UDP-forming] {ECO:0000313|EMBL:BAK85161.1}; TaxID=634177 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;"
SCN18_30_10_14_R4_P_scaffold_1280_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(863..1663)
DNA (801bp) protein (267aa)
Cellulose synthase operon protein YhjQ n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV91_9PROT
Cellulose synthase operon protein YhjQ {ECO:0000313|EMBL:EHM03105.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
yhjQ; Cellulose synthase operon protein YhjQ
SCN18_30_10_14_R4_P_scaffold_1280_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1770..2681)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Leishmania major RepID=E9AEK6_LEIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBZ12659.1}; TaxID=5664 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania major.;"
SCN18_30_10_14_R4_P_scaffold_1280_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2779..3957)
DNA (1179bp) protein (393aa)
Glucanase {ECO:0000256|RuleBase:RU361167}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361167};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
endo-1,4-beta-glucanase (EC:3.2.1.4)
Putative endoglucanase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVX3_9PROT
SCN18_30_10_14_R4_P_scaffold_1280_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4145..4375
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EB2677
Uncharacterized protein {ECO:0000313|EMBL:KKC24641.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCN18_30_10_14_R4_P_scaffold_1280_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4434..5351)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000365C757
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIO28225.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
LysR family regulatory protein
SCN18_30_10_14_R4_P_scaffold_1280_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..7316
DNA (1896bp) protein (632aa)
Transport ATP-binding protein CydCD n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HC25_9BURK
transport ATP-binding protein CydCD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_30_10_14_R4_P_scaffold_1280_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7316..9037
DNA (1722bp) protein (574aa)
ABC transporter n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00035E4FA8
ABC transporter {ECO:0000313|EMBL:KFL54748.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
transport ATP-binding protein CydCD
SCN18_30_10_14_R4_P_scaffold_1280_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9066..10184
DNA (1119bp) protein (373aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656, ECO:0000313|EMBL:CCC98715.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Putative histidine kinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANA3_AZOBR
putative histidine kinase
SCN18_30_10_14_R4_P_scaffold_1280_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10127..10771
DNA (645bp) protein (215aa)
Phytochrome n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132I0_RHOPS
phytochrome
Phytochrome {ECO:0000313|EMBL:ABE41009.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_30_10_14_R4_P_scaffold_1280_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10768..11427
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPV5_METSB
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACK50959.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_30_10_14_R4_P_scaffold_1280_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11634..12896
DNA (1263bp) protein (421aa)
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8D9_PELHB
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEQ52383.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_30_10_14_R4_P_scaffold_1280_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13256..14686
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXZ7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99627.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1280_trna_1
unknown

Not on your lists

comp(14842..14914)
DNA (73bp)
transferRNA Ile
SCN18_30_10_14_R4_P_scaffold_1280_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15399..17477)
DNA (2079bp) protein (693aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; DNA ligase; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=DNLJ_GRABC
SCN18_30_10_14_R4_P_scaffold_1280_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17474..19171)
DNA (1698bp) protein (566aa)
DNA repair protein RecN n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV34_GRABC
DNA repair protein recN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_1280_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19194..20048)
DNA (855bp) protein (285aa)
Outer membrane protein assembly factor BamD n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV33_GRABC
Lipoprotein, ComL family protein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_1280_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20095..20328)
DNA (234bp) protein (78aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EFH12796.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EFH12796.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIS3_9PROT
negative regulator of AmpC, AmpD
SCN18_30_10_14_R4_P_scaffold_1280_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20383..20826)
DNA (444bp) protein (148aa)
putative N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5E9_9PROT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EHL97643.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCN18_30_10_14_R4_P_scaffold_1280_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20926..21708)
DNA (783bp) protein (261aa)
Heat shock protein DnaJ domain protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2J2_ACICJ
Heat shock protein DnaJ-like protein DjlA {ECO:0000313|EMBL:GAN78320.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
DnaJ family protein
SCN18_30_10_14_R4_P_scaffold_1280_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21921..22784
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XU94_PARAH
Uncharacterized protein {ECO:0000313|EMBL:AID28858.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1280_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23155..23742)
DNA (588bp) protein (196aa)
Putative ring-cleavage extradiol dioxygenase n=1 Tax=Acidovorax sp. CF316 RepID=J1EAT8_9BURK
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_30_10_14_R4_P_scaffold_1280_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23762..25363)
DNA (1602bp) protein (534aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036DF7C8
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIG59927.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
ABC transporter peptide-binding protein
SCN18_30_10_14_R4_P_scaffold_1280_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25610..27400
DNA (1791bp) protein (597aa)
Putative glycoside hydrolase, family 15 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B409_9RHIZ
putative glycoside hydrolase, family 15
Putative glycoside hydrolase, family 15 {ECO:0000313|EMBL:AGK56927.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R4_P_scaffold_1280_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27521..30079)
DNA (2559bp) protein (853aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TDC7_BURSG
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AJE16124.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
SCN18_30_10_14_R4_P_scaffold_1280_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30416..31168
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1B1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP61851.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
3-ketoacyl-ACP reductase
Displaying 26 items

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