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SCN18_30_10_14_R4_P_scaffold_1854

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1854_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1249
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E804_9SPHN
monooxygenase
Uncharacterized protein {ECO:0000313|EMBL:EHJ62647.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCN18_30_10_14_R4_P_scaffold_1854_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1317..2393
DNA (1077bp) protein (359aa)
Alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:AFY34851.1}; EC=1.14.14.5 {ECO:0000313|EMBL:AFY34851.1};; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
Alkanesulfonate monooxygenase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PPI8_9CYAN
SCN18_30_10_14_R4_P_scaffold_1854_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2521..4467)
DNA (1947bp) protein (649aa)
Possible TrapT family, fused dctM-Q subunits, C4-dicarboxylate transport n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD25_9ALTE
Possible TrapT family, fused dctM-Q subunits, C4-dicarboxylate transport {ECO:0000313|EMBL:EBA00172.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ELB17.;"
C4-dicarboxylate transporte DctMQ
SCN18_30_10_14_R4_P_scaffold_1854_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4746..5882
DNA (1137bp) protein (379aa)
Trap transporter solute receptor, taxi family n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CTJ7_9RHOB
Trap transporter solute receptor, taxi family {ECO:0000313|EMBL:EEW60305.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
Trap transporter solute receptor, taxi family
SCN18_30_10_14_R4_P_scaffold_1854_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6012..7784)
DNA (1773bp) protein (591aa)
Glucoamylase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PIG5_9RHOB
Glucoamylase {ECO:0000313|EMBL:EJW10882.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
glycoside hydrolase 15-like protein
SCN18_30_10_14_R4_P_scaffold_1854_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7789..8781)
DNA (993bp) protein (331aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T8N6_BURPP
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACD20699.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCN18_30_10_14_R4_P_scaffold_1854_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9131..10921
DNA (1791bp) protein (597aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KA52_NITWC
thiamine pyrophosphate domain-containing TPP-binding protein
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:ADJ29410.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
SCN18_30_10_14_R4_P_scaffold_1854_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..12035
DNA (1107bp) protein (369aa)
mandelate racemase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B9783
Mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADX57414.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
SCN18_30_10_14_R4_P_scaffold_1854_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12073..13062
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAJ3_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29420.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
SCN18_30_10_14_R4_P_scaffold_1854_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13055..13702
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HVA3_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EQM78340.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1854_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13692..15338
DNA (1647bp) protein (549aa)
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site n=1 Tax=Rhodovulum sp. PH10 RepID=J6LC82_9RHOB
Choline dehydrogenase {ECO:0000313|EMBL:KIZ45220.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
oxidoreductase NAD(P)-binding subunit
SCN18_30_10_14_R4_P_scaffold_1854_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15629..15943
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RGU6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR22510.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCN18_30_10_14_R4_P_scaffold_1854_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15990..17180)
DNA (1191bp) protein (397aa)
UreA/short-chain binding protein of ABC transporter n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHU4_METNO
UreA/short-chain binding protein of ABC transporter
UreA/short-chain binding protein of ABC transporter {ECO:0000313|EMBL:ACL55982.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_30_10_14_R4_P_scaffold_1854_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17189..18151)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003693AD0
Uncharacterized protein {ECO:0000313|EMBL:GAN77396.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
SCN18_30_10_14_R4_P_scaffold_1854_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18148..18426)
DNA (279bp) protein (93aa)
Caa(3)-type oxidase subunit IV n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CMG8_9RHIZ
Caa(3)-type oxidase, subunit IV
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:AIQ89008.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
SCN18_30_10_14_R4_P_scaffold_1854_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18431..19078)
DNA (648bp) protein (216aa)
Cytochrome c oxidase subunit III (EC:1.9.3.1)
cytochrome oxidase subunit III n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000375990E
CyoC protein {ECO:0000313|EMBL:BAQ44978.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCN18_30_10_14_R4_P_scaffold_1854_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19079..20722)
DNA (1644bp) protein (548aa)
ctaD; Cytochrome c oxidase, subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YXM3_9RHIZ
Cytochrome oxidase/cytochrome c oxidase subunit I {ECO:0000313|EMBL:GAN76730.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R4_P_scaffold_1854_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20719..21684)
DNA (966bp) protein (322aa)
Cytochrome c oxidase subunit II n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XUD3_9RHIZ
Cytochrome B561 {ECO:0000313|EMBL:KGM34408.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
cytochrome B561
SCN18_30_10_14_R4_P_scaffold_1854_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21681..22211)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CMG5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIZ84695.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
protein of unassigned function
SCN18_30_10_14_R4_P_scaffold_1854_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22204..23259)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UET6_METS4
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44974.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1854_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23256..23795)
DNA (540bp) protein (180aa)
Quinol:cytochrome C oxidoreductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FF23_9RHIZ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44972.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Putative cytochrome c family protein
SCN18_30_10_14_R4_P_scaffold_1854_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23792..24337)
DNA (546bp) protein (182aa)
Polysulphide reductase NrfD n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M0T1_METRJ
polysulfide reductase NrfD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ACB23051.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCN18_30_10_14_R4_P_scaffold_1854_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24340..25701)
DNA (1362bp) protein (454aa)
Polysulfide reductase NrfD n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YXL9_9RHIZ
Polysulfide reductase NrfD {ECO:0000313|EMBL:EMS41229.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
polysulfide reductase NrfD
SCN18_30_10_14_R4_P_scaffold_1854_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25703..28642)
DNA (2940bp) protein (980aa)
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XUC8_9RHIZ
HybA protein {ECO:0000313|EMBL:BAQ44971.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Molybdopterin oxidoreductase, iron-sulfur binding subunit
SCN18_30_10_14_R4_P_scaffold_1854_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28630..29148)
DNA (519bp) protein (173aa)
Chaperone protein HtpG n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CMG1_9RHIZ
chaperone protein HtpG
Chaperone protein HtpG {ECO:0000313|EMBL:EIZ84690.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
Displaying 25 items

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