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SCN18_30_10_14_R5_P_scaffold_492

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_492_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..653)
DNA (651bp) protein (217aa)
Putative lipoprotein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SI29_NOCSJ
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABL81464.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCN18_30_10_14_R5_P_scaffold_492_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(894..1658)
DNA (765bp) protein (255aa)
Putative cAMP receptor protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7I1_9BACT
putative cAMP receptor protein
Putative cAMP receptor protein {ECO:0000313|EMBL:CBK43327.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
SCN18_30_10_14_R5_P_scaffold_492_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1930..2244)
DNA (315bp) protein (105aa)
Blue (Type 1) copper domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJL1_MESCW
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ADV13773.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R5_P_scaffold_492_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2368..3060)
DNA (693bp) protein (231aa)
UPI0003CE1875 related cluster n=1 Tax=unknown RepID=UPI0003CE1875
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
sigma-70 family RNA polymerase sigma factor
SCN18_30_10_14_R5_P_scaffold_492_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3241..4779
DNA (1539bp) protein (513aa)
Uncharacterized NAD(FAD)-dependent dehydrogenases n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SL4_NITEU
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFC64963.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD(FAD)-dependent dehydrogenase
SCN18_30_10_14_R5_P_scaffold_492_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4873..6891)
DNA (2019bp) protein (673aa)
hydantoinase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003034112
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:CDX39899.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Hydantoinase/oxoprolinase
SCN18_30_10_14_R5_P_scaffold_492_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7342..7563
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS10156.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
SCN18_30_10_14_R5_P_scaffold_492_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7595..8434)
DNA (840bp) protein (280aa)
LysR family transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSY4_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:CDX39927.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LysR family transcriptional regulator HdfR
SCN18_30_10_14_R5_P_scaffold_492_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8572..9237
DNA (666bp) protein (222aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E90996
5-formyltetrahydrofolate cyclo-ligase
SCN18_30_10_14_R5_P_scaffold_492_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9343..10938
DNA (1596bp) protein (532aa)
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:CDX39933.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDX39933.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ctaD; Cytochrome c oxidase subunit 1 (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F6F032
SCN18_30_10_14_R5_P_scaffold_492_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11105..12526
DNA (1422bp) protein (474aa)
glutamine synthetase n=1 Tax=Rhizobium loti RepID=UPI0003799FC5
glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:BAB52799.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_30_10_14_R5_P_scaffold_492_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12648..13934
DNA (1287bp) protein (429aa)
Oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBA6_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:EHH10987.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
oxidoreductase
SCN18_30_10_14_R5_P_scaffold_492_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13952..14821)
DNA (870bp) protein (290aa)
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGD7_MESOW
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX32918.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LysR family transcriptional regulator
SCN18_30_10_14_R5_P_scaffold_492_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14930..16594
DNA (1665bp) protein (555aa)
Na+/Picotransporter n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TC82_MESCW
Na+ cotransporter {ECO:0000313|EMBL:KJF67941.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Na+/Picotransporter
SCN18_30_10_14_R5_P_scaffold_492_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16699..17898
DNA (1200bp) protein (400aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSN6_MESAW
2-aminoethylphosphonate--pyruvate transaminase
SCN18_30_10_14_R5_P_scaffold_492_16
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17926..19188
DNA (1263bp) protein (421aa)
Phosphonoacetate hydrolase {ECO:0000313|EMBL:CDX15780.1}; EC=3.11.1.2 {ECO:0000313|EMBL:CDX15780.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Phosphonoacetate hydrolase n=5 Tax=Rhizobium meliloti RepID=F6C404_SINMB
phosphonoacetate hydrolase
SCN18_30_10_14_R5_P_scaffold_492_17
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19199..20653
DNA (1455bp) protein (485aa)
PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1789A
Phosphonoacetaldehyde dehydrogenase {ECO:0000313|EMBL:CDX32921.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphonoacetaldehyde dehydrogenase
SCN18_30_10_14_R5_P_scaffold_492_18
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20671..21783
DNA (1113bp) protein (371aa)
PREDICTED: ornithine aminotransferase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1514D
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDX32923.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
FAD dependent oxidoreductase
SCN18_30_10_14_R5_P_scaffold_492_19
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21860..22636
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375AC03
Integral membrane protein {ECO:0000313|EMBL:EDP63219.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_492_20
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22892..23914
DNA (1023bp) protein (341aa)
Putative iron uptake ABC transporter periplasmic solute-binding protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7XFX6_SINMM
putative iron uptake ABC transporter periplasmic solute-binding protein precursor
Putative iron uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:AEH83452.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCN18_30_10_14_R5_P_scaffold_492_21
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23981..25141
DNA (1161bp) protein (387aa)
Fe(3+) ions import ATP-binding protein FbpC 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVU3_9RHIZ
putative ATP-binding component of ABC transporter
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHK46721.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_30_10_14_R5_P_scaffold_492_22
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25143..27152
DNA (2010bp) protein (670aa)
Ferric transport system permease protein FbpB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEF0_9RHIZ
Ferric transport system permease protein FbpB {ECO:0000313|EMBL:EYR81465.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane component of ABC transporter
SCN18_30_10_14_R5_P_scaffold_492_23
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27170..28348)
DNA (1179bp) protein (393aa)
PREDICTED: cystathionine gamma-lyase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A63E
Cystathionine beta-lyase {ECO:0000313|EMBL:ESW88905.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
cystathionine gamma-synthase
SCN18_30_10_14_R5_P_scaffold_492_24
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28345..29769)
DNA (1425bp) protein (475aa)
Cystathionine beta-synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DX5_RHILO
cystathionine beta-synthase
Cystathionine beta-synthase {ECO:0000313|EMBL:BAB51145.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_30_10_14_R5_P_scaffold_492_25
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29916..30179)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YM11_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH02349.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Protein of unknown function (DUF768)
SCN18_30_10_14_R5_P_scaffold_492_trna_1
unknown

Not on your lists

comp(30343..30416)
DNA (74bp)
transferRNA His
SCN18_30_10_14_R5_P_scaffold_492_26
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30719..31177)
DNA (459bp) protein (153aa)
Phasin n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM73_MESCW
phasin
Phasin {ECO:0000313|EMBL:ADV11572.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R5_P_scaffold_492_27
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31428..34802
DNA (3375bp) protein (1125aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
PAS sensor protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXV7_9RHIZ
two component histidine protein kinase
SCN18_30_10_14_R5_P_scaffold_492_28
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35081..37039)
DNA (1959bp) protein (653aa)
Acetyl-coenzyme A synthetase 1 {ECO:0000313|EMBL:CDX43193.1}; EC=6.2.1.1 {ECO:0000313|EMBL:CDX43193.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
acetoacetyl-CoA synthetase (EC:6.2.1.1)
Acetoacetyl-CoA synthetase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988Y6_RHILO
SCN18_30_10_14_R5_P_scaffold_492_29
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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37262..39127
DNA (1866bp) protein (622aa)
UPI0003CF6A41 related cluster n=1 Tax=unknown RepID=UPI0003CF6A41
Membrane assembly protein AsmA {ECO:0000313|EMBL:ESW84919.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
uncharacterized protein involved in outer membrane biogenesis
Displaying items 1-30 of 32 in total

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