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SCN18_31_3_15_R1_B_scaffold_466

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R1_B_scaffold_466_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
hypothetical protein, partial n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000367AD7A
Glycosyl transferase {ECO:0000313|EMBL:KIO48891.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
glycosyl transferase family protein
SCN18_31_3_15_R1_B_scaffold_466_2
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216..1322)
DNA (1107bp) protein (369aa)
Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (Forms a complex with YaeT, YfiO, and YfgL) Lipoprotein-34 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ51_9PROT
Lipoprotein {ECO:0000313|EMBL:KIO48985.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
NlpBDapX lipoprotein
SCN18_31_3_15_R1_B_scaffold_466_3
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1521..2414)
DNA (894bp) protein (298aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DAPA_NITMU
SCN18_31_3_15_R1_B_scaffold_466_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2721..5330)
DNA (2610bp) protein (870aa)
ClpB protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKM3_9PROT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ATPase with chaperone activity
SCN18_31_3_15_R1_B_scaffold_466_5
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5526..6404
DNA (879bp) protein (293aa)
Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000313|EMBL:CCU63437.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CCU63437.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Quinolinate phosphoribosyltransferase [decarboxylating] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ0_9PROT
SCN18_31_3_15_R1_B_scaffold_466_6
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..8309
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B84
Uncharacterized protein {ECO:0000313|EMBL:EEF62673.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_466_7
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8374..8667)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHA7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48364.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_466_8
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9271..10476
DNA (1206bp) protein (402aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLA5_9PROT
Sodium:proton exchanger {ECO:0000313|EMBL:KIO48897.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Sodium/hydrogen exchanger
SCN18_31_3_15_R1_B_scaffold_466_9
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10473..11588
DNA (1116bp) protein (372aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609, ECO:0000256|SAAS:SAAS00078222};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Carboxylate-amine ligase EBAPG3_24820 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKM6_9PROT
carboxylate-amine ligase
SCN18_31_3_15_R1_B_scaffold_466_10
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11813..12586
DNA (774bp) protein (258aa)
Glutamine amidotransferase, class I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVT0_9PROT
Glutamine amidotransferase, class I {ECO:0000313|EMBL:CCU63440.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase C26
SCN18_31_3_15_R1_B_scaffold_466_11
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12664..14127)
DNA (1464bp) protein (488aa)
Threonine synthase {ECO:0000313|EMBL:CCU63450.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CCU63450.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVT9_9PROT
SCN18_31_3_15_R1_B_scaffold_466_12
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14249..15565)
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ63_9PROT
SCN18_31_3_15_R1_B_scaffold_466_13
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15642..16934)
DNA (1293bp) protein (431aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CCU63452.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CCU63452.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
aminotransferase AlaT (EC:2.6.1.2)
Aspartate aminotransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR1_9PROT
SCN18_31_3_15_R1_B_scaffold_466_14
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17015..17461
DNA (447bp) protein (149aa)
Membrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKN6_9PROT
Membrane protein {ECO:0000313|EMBL:CCU63454.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_466_15
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17516..18706)
DNA (1191bp) protein (397aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVU5_9PROT
Histidine kinase {ECO:0000313|EMBL:KIO48903.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
response regulator receiver/diguanylate phosphodiesterase
SCN18_31_3_15_R1_B_scaffold_466_16
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18983..23155)
DNA (4173bp) protein (1391aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
multi-sensor hybrid histidine kinase
SCN18_31_3_15_R1_B_scaffold_466_17
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23152..24429)
DNA (1278bp) protein (426aa)
Urea ABC transporter, urea binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLB9_9PROT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIO48905.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter, periplasmic binding protein
SCN18_31_3_15_R1_B_scaffold_466_18
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24674..25618)
DNA (945bp) protein (315aa)
Deacetylases, including yeast histone deacetylase and acetoin utilization protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKN9_9PROT
Deacetylases, including yeast histone deacetylase and acetoin utilization protein {ECO:0000313|EMBL:CCU63459.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
histone deacetylase superfamily protein
SCN18_31_3_15_R1_B_scaffold_466_19
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26015..27955
DNA (1941bp) protein (647aa)
GGDEF and EAL domain proteins n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVV0_9PROT
Diguanylate cyclase {ECO:0000313|EMBL:KIO48907.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
diguanylate cyclase/phosphodiesterase
SCN18_31_3_15_R1_B_scaffold_466_20
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28127..30283
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ72_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48908.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_466_21
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30390..31409
DNA (1020bp) protein (340aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR7_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SCN18_31_3_15_R1_B_scaffold_466_22
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31446..31838)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS49_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62205.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_466_23
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32135..33250
DNA (1116bp) protein (372aa)
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH8_9PROT
Probable transmembrane protein {ECO:0000313|EMBL:CCU63369.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
transmembrane protein
SCN18_31_3_15_R1_B_scaffold_466_24
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33331..34689)
DNA (1359bp) protein (453aa)
Cardiolipin synthetase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLC4_9PROT
Cardiolipin synthase {ECO:0000313|EMBL:KIO48910.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phospholipase D/transphosphatidylase
SCN18_31_3_15_R1_B_scaffold_466_25
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34942..35535
DNA (594bp) protein (198aa)
SCN18_31_3_15_R1_B_scaffold_466_26
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35495..35968)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVV6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63465.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
YbhB and YbcL
SCN18_31_3_15_R1_B_scaffold_466_27
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36169..36618)
DNA (450bp) protein (150aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLC8_9PROT
Histidine kinase {ECO:0000313|EMBL:KIO48911.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
signal-transduction protein
SCN18_31_3_15_R1_B_scaffold_466_28
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36762..37220)
DNA (459bp) protein (153aa)
Heat shock protein Hsp20 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9V1_NITMU
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ABB74470.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCN18_31_3_15_R1_B_scaffold_466_29
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37311..37592)
DNA (282bp) protein (94aa)
SCN18_31_3_15_R1_B_scaffold_466_30
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37789..38601)
DNA (813bp) protein (271aa)
Kazal-type serine protease inhibitor domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLD1_9PROT
Kazal-type serine protease inhibitor domain {ECO:0000313|EMBL:CCU63473.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proteinase inhibitor I1, Kazal
Displaying items 1-30 of 53 in total

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