ggKbase home page

SCN18_31_3_15_R1_B_scaffold_835

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R1_B_scaffold_835_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2104
DNA (2103bp) protein (701aa)
SCN18_31_3_15_R1_B_scaffold_835_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2104..2907
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6A7FE
Uncharacterized protein {ECO:0000313|EMBL:KGT77132.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCN18_31_3_15_R1_B_scaffold_835_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2958..3176
DNA (219bp) protein (73aa)
SCN18_31_3_15_R1_B_scaffold_835_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3226..3873
DNA (648bp) protein (216aa)
UPI0003D063A2 related cluster n=1 Tax=unknown RepID=UPI0003D063A2
Uncharacterized protein {ECO:0000313|EMBL:ESZ39797.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_835_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3870..4244
DNA (375bp) protein (125aa)
SCN18_31_3_15_R1_B_scaffold_835_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4247..4885
DNA (639bp) protein (213aa)
Serine protease DO-like n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LS4_MESSB
serine protease DO-like precursor
Serine protease DO-like {ECO:0000313|EMBL:ABG61651.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_31_3_15_R1_B_scaffold_835_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5059..5511
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003001384
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ16115.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCN18_31_3_15_R1_B_scaffold_835_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5513..6595
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F9E108
integrase
Integrase {ECO:0000313|EMBL:BAQ16116.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCN18_31_3_15_R1_B_scaffold_835_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6873..8027)
DNA (1155bp) protein (385aa)
lldA; L-lactate dehydrogenase LldA (EC:1.1.2.3)
L-lactate dehydrogenase LldA {ECO:0000313|EMBL:BAL96993.1}; EC=1.1.2.3 {ECO:0000313|EMBL:BAL96993.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
L-lactate dehydrogenase LldA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVF6_RUBGI
SCN18_31_3_15_R1_B_scaffold_835_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8120..9250
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037965C7
Uncharacterized protein {ECO:0000313|EMBL:EOS77637.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative monosaccharide-transporting ATPase
SCN18_31_3_15_R1_B_scaffold_835_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9345..10874
DNA (1530bp) protein (510aa)
Ribose import ATP-binding protein RbsA 1 {ECO:0000255|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000255|HAMAP-Rule:MF_01716};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C383E
ABC transporter-like protein
SCN18_31_3_15_R1_B_scaffold_835_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10871..11881
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373B743
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
SCN18_31_3_15_R1_B_scaffold_835_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11922..12707
DNA (786bp) protein (262aa)
Dehydrogenase with different specificity n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S7Y3_9RHOB
Dehydrogenase with different specificity {ECO:0000313|EMBL:EPX86290.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
putative short chain dehydrogenase adh_short
SCN18_31_3_15_R1_B_scaffold_835_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12738..13448
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C5FBC
GntR family transcriptional regulator {ECO:0000313|EMBL:CDX19850.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GntR family transcriptional regulator
SCN18_31_3_15_R1_B_scaffold_835_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13656..14003
DNA (348bp) protein (116aa)
Putative UDP-glucose 4-epimerase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YSN5_BRASO
NAD-dependent epimerase {ECO:0000313|EMBL:KGJ20091.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
UDP-glucose 4-epimerase
SCN18_31_3_15_R1_B_scaffold_835_trna_1
unknown

Not on your lists

14211..14283
DNA (73bp)
transferRNA Val
SCN18_31_3_15_R1_B_scaffold_835_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14305..16257
DNA (1953bp) protein (651aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036ECB8E
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABR60607.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCN18_31_3_15_R1_B_scaffold_835_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16312..17715)
DNA (1404bp) protein (468aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVP0_GRABC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI61112.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCN18_31_3_15_R1_B_scaffold_835_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18088..18873
DNA (786bp) protein (262aa)
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036C7E4B
Probable enoyl-CoA hydratase paaF {ECO:0000313|EMBL:GAJ37484.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
2,3-dehydroadipyl-CoA hydratase
SCN18_31_3_15_R1_B_scaffold_835_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18966..19316
DNA (351bp) protein (117aa)
SCN18_31_3_15_R1_B_scaffold_835_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19412..19882
DNA (471bp) protein (157aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J7M1_NOSP7
Uncharacterized protein {ECO:0000313|EMBL:KFL27516.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glutathione-dependent formaldehyde-activating protein
SCN18_31_3_15_R1_B_scaffold_835_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19888..20763
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D63D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00260.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_31_3_15_R1_B_scaffold_835_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21027..21200)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000369442C
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:EKN00863.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCN18_31_3_15_R1_B_scaffold_835_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21315..22109
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003764B79
Uncharacterized protein {ECO:0000313|EMBL:KGM31498.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_835_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22134..23546)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363C4A2
Chromosome partition protein Smc {ECO:0000313|EMBL:CEJ14556.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_835_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23699..24259)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5P6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36771.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_835_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24472..25137
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037F3CF2
Uncharacterized protein {ECO:0000313|EMBL:EIM27724.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_835_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25155..25520
DNA (366bp) protein (122aa)
Chemotaxis protein CheY n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CJL3_9RHOB
Chemotaxis protein CheY {ECO:0000313|EMBL:EFO31580.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
cheY; response regulator receiver domain-containing protein (CheY-like)
SCN18_31_3_15_R1_B_scaffold_835_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25671..26372)
DNA (702bp) protein (234aa)
chemotaxis protein CheY n=1 Tax=Kaistia granuli RepID=UPI000373DBCB
Response regulator {ECO:0000313|EMBL:EDQ34327.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
two-component cell cycle transcriptional regulator ctrA, winged helix family
SCN18_31_3_15_R1_B_scaffold_835_29
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26806..27177
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E8F5D
Flagellar export protein FliJ {ECO:0000313|EMBL:EEE45246.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
flagellar export FliJ
Displaying items 1-30 of 38 in total

View Taxonomy