name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_31_3_15_R1_B_scaffold_183_1
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like
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Not on your lists |
1..135
|
hypothetical protein, partial n=1 Tax=alpha proteobacterium L41A RepID=UPI0003683CD7
Uncharacterized protein {ECO:0000313|EMBL:KJC50914.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
transposase
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SCN18_31_3_15_R1_B_scaffold_183_2
unknown
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Not on your lists |
comp(128..310)
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This feature has no annotations |
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SCN18_31_3_15_R1_B_scaffold_183_trna_5
unknown
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Not on your lists |
comp(998..1069)
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transferRNA Glu
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SCN18_31_3_15_R1_B_scaffold_183_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1378..1626
|
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X212_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33725.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
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SCN18_31_3_15_R1_B_scaffold_183_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1920..2369)
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Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLF6_NITHX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABE62941.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_5
unknown
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Not on your lists |
comp(2531..2752)
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This feature has no annotations |
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SCN18_31_3_15_R1_B_scaffold_183_6
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage
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Not on your lists |
3235..3843
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Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLF9_NITHX
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE62938.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4237..4728
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLG0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62937.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_trna_1
unknown
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Not on your lists |
4805..4878
|
transferRNA Pro
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SCN18_31_3_15_R1_B_scaffold_183_8
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage
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Not on your lists |
comp(5114..5956)
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Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMC1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62626.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6565..6795
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMC0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62627.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_10
unknown
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Not on your lists |
comp(6894..7130)
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This feature has no annotations |
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SCN18_31_3_15_R1_B_scaffold_183_11
unknown
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Not on your lists |
7722..7919
|
This feature has no annotations |
|
SCN18_31_3_15_R1_B_scaffold_183_12
unknown
|
Not on your lists |
7962..8129
|
This feature has no annotations |
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SCN18_31_3_15_R1_B_scaffold_183_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8424..9725
|
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Serine hydroxymethyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLYA_NITHX
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SCN18_31_3_15_R1_B_scaffold_183_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
9850..10332
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Transcriptional repressor NrdR n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=NRDR_NITWN
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
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SCN18_31_3_15_R1_B_scaffold_183_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10329..11480
|
Riboflavin biosynthesis protein RibD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB7_NITHX
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11561..12169
|
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB6_NITHX
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABE62631.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12238..12729
|
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000255|HAMAP-Rule:MF_00178};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RISB_NITHX
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SCN18_31_3_15_R1_B_scaffold_183_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12737..13222
|
N utilization substance protein B homolog n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=NUSB_NITWN
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
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SCN18_31_3_15_R1_B_scaffold_183_19
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13504..14475
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thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Thiamine-monophosphate kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB3_NITHX
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SCN18_31_3_15_R1_B_scaffold_183_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14689..17745)
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Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribonuclease E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB1_NITHX
ribonuclease
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SCN18_31_3_15_R1_B_scaffold_183_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18444..19742
|
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABE62637.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABE62637.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB0_NITHX
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SCN18_31_3_15_R1_B_scaffold_183_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19915..22407
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penicillin-binding protein 1A (EC:2.4.1.129)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABE62638.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABE62638.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Penicillin-binding protein 1A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA9_NITHX
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SCN18_31_3_15_R1_B_scaffold_183_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22706..23674
|
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA8_NITHX
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24107..25504
|
Type I secretion outer membrane protein, TolC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA7_NITHX
Type I secretion outer membrane protein, TolC
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:ABE62640.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25805..26482
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62641.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26721..29585
|
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA5_NITHX
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SCN18_31_3_15_R1_B_scaffold_183_27
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
29582..30748
|
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA4_NITHX
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE62643.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_31_3_15_R1_B_scaffold_183_28
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(30729..31358)
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Putative 3-methyladenine DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000255|HAMAP-Rule:MF_00527};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=3MGH_NITHX
3-methyladenine DNA glycosylase
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