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SCN18_31_3_15_R1_B_scaffold_991

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R1_B_scaffold_991_1
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like

Not on your lists

2..133
DNA (132bp) protein (44aa)
hypothetical protein, partial n=1 Tax=alpha proteobacterium L41A RepID=UPI0003683CD7
Uncharacterized protein {ECO:0000313|EMBL:KJC50914.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
transposase
SCN18_31_3_15_R1_B_scaffold_991_2
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(552..1637)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FB212
Uncharacterized protein {ECO:0000313|EMBL:EKS34059.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_991_3
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1939..2694
DNA (756bp) protein (252aa)
hypothetical protein id=14625980 bin=bin7_NC10_sister species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
SCN18_31_3_15_R1_B_scaffold_991_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4557..4784)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61882.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_5
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(5098..7443)
DNA (2346bp) protein (782aa)
Molybdopterin oxidoreductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIC6_NITHX
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ABE64021.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
molybdopterin oxidoreductase
SCN18_31_3_15_R1_B_scaffold_991_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7875..8303
DNA (429bp) protein (143aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIC7_NITHX
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABE64020.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_7
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8515..9165
DNA (651bp) protein (217aa)
Cytochrome c biogenesis factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIC8_NITHX
cytochrome c biogenesis factor
Cytochrome c biogenesis factor {ECO:0000313|EMBL:ABE64019.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_8
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9399..10466
DNA (1068bp) protein (356aa)
Multicopper oxidase, type 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIC9_NITHX
multicopper oxidase, type 3
Multicopper oxidase, type 3 {ECO:0000313|EMBL:ABE64018.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_9
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10489..11166
DNA (678bp) protein (226aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QID0_NITHX
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABE64017.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_10
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11166..11522
DNA (357bp) protein (119aa)
Cytochrome c, class IC n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTY6_9BRAD
Cytochrome c, class IC {ECO:0000313|EMBL:EAQ36621.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
cytochrome c, class IC
SCN18_31_3_15_R1_B_scaffold_991_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11549..12538
DNA (990bp) protein (330aa)
Multicopper oxidase, type 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QID2_NITHX
multicopper oxidase, type 3
Multicopper oxidase, type 3 {ECO:0000313|EMBL:ABE64015.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13032..14882
DNA (1851bp) protein (617aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QID7_NITHX
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABE64010.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15151..16944
DNA (1794bp) protein (598aa)
Glycoside hydrolase 15-related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QID8_NITHX
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ABE64009.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
glycoside hydrolase 15-related
SCN18_31_3_15_R1_B_scaffold_991_14
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17051..17854)
DNA (804bp) protein (268aa)
Cof protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QID9_NITHX
Cof protein
Cof protein {ECO:0000313|EMBL:ABE64008.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17851..18387)
DNA (537bp) protein (179aa)
carbohydrate kinase (EC:2.7.1.12)
Gluconate kinase, SKI family {ECO:0000313|EMBL:ABE64007.1}; EC=2.7.1.12 {ECO:0000313|EMBL:ABE64007.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Gluconate kinase, SKI family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE0_NITHX
SCN18_31_3_15_R1_B_scaffold_991_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18384..19121)
DNA (738bp) protein (246aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ABE64006.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABE64006.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
6-phosphogluconolactonase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE1_NITHX
6-phosphogluconolactonase
SCN18_31_3_15_R1_B_scaffold_991_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19118..20632)
DNA (1515bp) protein (505aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE2_NITHX
SCN18_31_3_15_R1_B_scaffold_991_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20632..21645)
DNA (1014bp) protein (338aa)
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:ABE64004.1}; EC=1.1.1.44 {ECO:0000313|EMBL:ABE64004.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
6-phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE3_NITHX
6-phosphogluconate dehydrogenase
SCN18_31_3_15_R1_B_scaffold_991_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21915..24863)
DNA (2949bp) protein (983aa)
bifunctional transaldolase/phosoglucose isomerase (EC:2.2.1.2 5.3.1.9)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Transaldolase / glucose-6-phosphate isomerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE4_NITHX
SCN18_31_3_15_R1_B_scaffold_991_20
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25209..25466
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64002.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25515..25991
DNA (477bp) protein (159aa)
glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE6_NITHX
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25988..26245
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPA0_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05891.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_31_3_15_R1_B_scaffold_991_23
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26370..26726
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIE8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63999.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_991_24
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like

Not on your lists

comp(26952..27086)
DNA (135bp) protein (45aa)
hypothetical protein, partial n=1 Tax=alpha proteobacterium L41A RepID=UPI0003683CD7
Uncharacterized protein {ECO:0000313|EMBL:KJC50914.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
transposase
Displaying 24 items

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