name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_31_3_15_R3_B_scaffold_2_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2..136)
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RNA polymerase subunit sigma-70 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030F69CA
RNA polymerase subunit sigma-70
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:AJP72233.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(307..1032)
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carboxymethylenebutenolidase n=1 Tax=Sphingomonas elodea RepID=UPI000263137B
carboxymethylenebutenolidase
Carboxymethylenebutenolidase {ECO:0000313|EMBL:AJP73942.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1101..1787
|
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phosphoglyceromutase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030FBC8A
gpmA; phosphoglyceromutase
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SCN18_31_3_15_R3_B_scaffold_2_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1790..2050)
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SCN18_31_3_15_R3_B_scaffold_2_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2238..2717
|
purE; N5-carboxyaminoimidazole ribonucleotide mutase (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Sphingomonas elodea RepID=UPI0002631322
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SCN18_31_3_15_R3_B_scaffold_2_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2714..3790
|
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phosphoribosylaminoimidazole carboxylase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030015E0
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SCN18_31_3_15_R3_B_scaffold_2_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3822..4754)
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Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50707.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
ABC transporter
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SCN18_31_3_15_R3_B_scaffold_2_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5079..5378)
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signal peptide protein n=1 Tax=Sphingomonas elodea RepID=UPI00026306F4
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AJP73932.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5393..8260)
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peptidase M16 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030D1421
peptidase M16
Peptidase M16 {ECO:0000313|EMBL:AJP73933.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8388..10097
|
Peptidase M28 n=1 Tax=Sphingobium baderi LL03 RepID=T0HZ10_9SPHN
Peptidase M28 {ECO:0000313|EMBL:KIY12787.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
peptidase M28
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SCN18_31_3_15_R3_B_scaffold_2_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10186..12000
|
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6X5_OWEHD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
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SCN18_31_3_15_R3_B_scaffold_2_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12102..14399)
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TonB-denpendent receptor n=1 Tax=Sphingomonas elodea RepID=UPI0002632164
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AJP73934.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14636..17389
|
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DII7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL92674.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
hypothetical protein
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SCN18_31_3_15_R3_B_scaffold_2_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17494..19437
|
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DF6_STIAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
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SCN18_31_3_15_R3_B_scaffold_2_15
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19516..22095
|
ATPase AAA n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DE8367
clpB; chaperone protein ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_31_3_15_R3_B_scaffold_2_16
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22223..25315)
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TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VHP3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EJU12287.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
TonB-dependent receptor
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SCN18_31_3_15_R3_B_scaffold_2_17
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25585..26487)
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peptidase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC0E
peptidase
Peptidase {ECO:0000313|EMBL:AJP74734.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_18
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26487..26687)
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hypothetical protein n=1 Tax=Sphingomonas RepID=UPI00028865D9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73937.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_19
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26719..27987)
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Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
exodeoxyribonuclease VII large subunit n=1 Tax=Sphingomonas elodea RepID=UPI0002630201
exodeoxyribonuclease VII large subunit
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SCN18_31_3_15_R3_B_scaffold_2_20
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28094..29356
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Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:AJP73939.1}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phosphoribosylamine--glycine ligase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D671CA
phosphoribosylamine--glycine ligase
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SCN18_31_3_15_R3_B_scaffold_2_21
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29493..30263
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000367820A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73940.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_22
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(30443..31750)
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DNA-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI00026312FE
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJP73929.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_23
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31825..32277)
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tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
CMP deaminase n=1 Tax=Sphingomonas elodea RepID=UPI0002631300
CMP deaminase
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SCN18_31_3_15_R3_B_scaffold_2_24
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(32472..32768)
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hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631302
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73925.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_25
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
32942..33238
|
50S ribosomal protein L28 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F19EFA
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373, ECO:0000313|EMBL:AJP73924.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_26
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(33355..33972)
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Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YC93_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH86626.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
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SCN18_31_3_15_R3_B_scaffold_2_27
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34035..35033)
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hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631304
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74733.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_28
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(35222..35944)
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acetoacetyl-CoA reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002631305
acetoacetyl-CoA reductase
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AJP73923.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_2_29
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(35977..37002)
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hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ferrochelatase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031AF8AE
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SCN18_31_3_15_R3_B_scaffold_2_30
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36999..39239)
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aldehyde oxidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000360F2BA
aldehyde oxidase
Aldehyde oxidase {ECO:0000313|EMBL:AJP74732.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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