name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_31_3_15_R3_B_scaffold_26_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..2526
|
hypothetical protein, partial n=1 Tax=Pseudomonas putida RepID=UPI00037CDB26
Uncharacterized protein {ECO:0000313|EMBL:GAM00602.1}; Flags: Fragment;; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
|
|
SCN18_31_3_15_R3_B_scaffold_26_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2635..3957
|
Outer membrane efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX5_9SPHN
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12385.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
transporter
|
|
SCN18_31_3_15_R3_B_scaffold_26_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3954..6077
|
Type I secretion system ATPase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX4_9SPHN
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12384.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ATP-binding protein
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|
SCN18_31_3_15_R3_B_scaffold_26_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6074..7261
|
Type I secretion membrane fusion , HlyD family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX3_9SPHN
Putative type I secretion system membrane fusion protein {ECO:0000313|EMBL:GAM00605.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
secretion protein HlyD
|
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SCN18_31_3_15_R3_B_scaffold_26_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7396..7839
|
MarR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00606.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
|
|
SCN18_31_3_15_R3_B_scaffold_26_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7937..9232)
|
Nitrate ABC transporter ATP-binding protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q3K8_9CAUL
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESQ92440.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
nitrate ABC transporter ATP-binding protein
|
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SCN18_31_3_15_R3_B_scaffold_26_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9250..11004)
|
Sulfonate ABC transporter permease n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PVM4_9CAUL
Sulfonate ABC transporter permease {ECO:0000313|EMBL:ESQ92441.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
binding-protein-dependent transport system inner membrane protein
|
|
SCN18_31_3_15_R3_B_scaffold_26_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11272..11919)
|
Two-component system response regulator n=3 Tax=Xanthomonas RepID=G2LSP5_9XANT
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CAJ23781.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
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SCN18_31_3_15_R3_B_scaffold_26_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11916..12956)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
Two component sensor kinase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K163_AGRVS
two component sensor kinase
|
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SCN18_31_3_15_R3_B_scaffold_26_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13101..14684
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXK6_TISMK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AFK57494.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
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SCN18_31_3_15_R3_B_scaffold_26_trna_3
unknown
|
Not on your lists |
comp(14847..14933)
|
transferRNA Ser
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|
SCN18_31_3_15_R3_B_scaffold_26_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15056..15436
|
DNA-binding protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CABCF
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJP71349.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15555..15932
|
50S ribosomal protein L21 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0EE
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15958..16227
|
50S ribosomal protein L27 n=1 Tax=Sphingomonas elodea RepID=UPI0002631086
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
50S ribosomal protein L27
|
|
SCN18_31_3_15_R3_B_scaffold_26_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16402..16959
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000367E2FD
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AJP74292.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
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SCN18_31_3_15_R3_B_scaffold_26_15
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17065..17673
|
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631083
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP71345.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCN18_31_3_15_R3_B_scaffold_26_16
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17670..18029
|
|
|
SCN18_31_3_15_R3_B_scaffold_26_17
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18043..20007)
|
kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002631081
kinase
Kinase {ECO:0000313|EMBL:AJP74291.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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|
SCN18_31_3_15_R3_B_scaffold_26_18
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20053..21315)
|
8-amino-7-oxononanoate synthase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CABC3
8-amino-7-oxononanoate synthase
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AJP71344.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCN18_31_3_15_R3_B_scaffold_26_19
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21321..21563)
|
phosphopantetheine-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI000263107F
phosphopantetheine-binding protein
Phosphopantetheine-binding protein {ECO:0000313|EMBL:AJP71343.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_20
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21761..22201)
|
|
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SCN18_31_3_15_R3_B_scaffold_26_21
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22311..23936
|
Putative dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXI1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71468.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_22
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23933..24904)
|
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V478_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67094.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
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SCN18_31_3_15_R3_B_scaffold_26_23
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24993..25490
|
AsnC family transcriptional regulator n=1 Tax=Sphingomonas wittichii RepID=UPI0002E1DC71
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABQ67093.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
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SCN18_31_3_15_R3_B_scaffold_26_24
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25504..25812)
|
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V972_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC26199.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
|
|
SCN18_31_3_15_R3_B_scaffold_26_25
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26160..27065)
|
epimerase n=1 Tax=Sphingomonas elodea RepID=UPI000263107D
epimerase
Epimerase {ECO:0000313|EMBL:AJP71342.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_26
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27062..28168)
|
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000313|EMBL:AJP71341.1}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glutamate 5-kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B79AC6
glutamate 5-kinase
|
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SCN18_31_3_15_R3_B_scaffold_26_27
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28236..29333)
|
putative permease n=1 Tax=Sphingomonas elodea RepID=UPI0002631078
permease
Permease {ECO:0000313|EMBL:AJP71338.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_28
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29330..30544)
|
YjgP/YjgQ family permease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E14C5C
permease
Permease {ECO:0000313|EMBL:AJP74289.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCN18_31_3_15_R3_B_scaffold_26_29
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30673..31332)
|
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