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SCN18_31_3_15_R3_B_scaffold_27

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Displaying items 1-30 of 574 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R3_B_scaffold_27_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..137)
DNA (135bp) protein (45aa)
hypothetical protein, partial n=1 Tax=Sphingomonas elodea RepID=UPI000263138B
Uncharacterized protein {ECO:0000313|EMBL:GAD50929.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
lysM domain protein
SCN18_31_3_15_R3_B_scaffold_27_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

552..1469
DNA (918bp) protein (306aa)
SCN18_31_3_15_R3_B_scaffold_27_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1666..2709)
DNA (1044bp) protein (348aa)
rod shape-determining protein MreB n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287C8B4
rod shape-determining protein MreB
Rod shape-determining protein MreB and related proteins {ECO:0000313|EMBL:CCA90589.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_31_3_15_R3_B_scaffold_27_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3013..4179)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000377BBC0
Uncharacterized protein {ECO:0000313|EMBL:GAO40194.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative glycosyltransferase
SCN18_31_3_15_R3_B_scaffold_27_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..4899
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003799588
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:AJR24690.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
ECF subfamily RNA polymerase sigma-24 factor
SCN18_31_3_15_R3_B_scaffold_27_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4973..5905
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003692B72
Sphingomonas taxi strain 30a NODE_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28550.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
anti-FecI sigma factor FecR
SCN18_31_3_15_R3_B_scaffold_27_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5865..8213
DNA (2349bp) protein (783aa)
Secretin and TonB N terminus short domain protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FHJ4_9BACL
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26066.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
TonB-dependent receptor
SCN18_31_3_15_R3_B_scaffold_27_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8397..9038
DNA (642bp) protein (214aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas elodea RepID=UPI00026313AA
Polysaccharide deacetylase {ECO:0000313|EMBL:AJR24693.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
polysaccharide deacetylase
SCN18_31_3_15_R3_B_scaffold_27_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9026..10180
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000376D642
Glycosyl transferase {ECO:0000313|EMBL:ETI65296.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
group 1 glycosyl transferase
SCN18_31_3_15_R3_B_scaffold_27_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10156..11091
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631E50
Uncharacterized protein {ECO:0000313|EMBL:KHK91986.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_31_3_15_R3_B_scaffold_27_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11216..12295
DNA (1080bp) protein (360aa)
Possible membrane fusion protein MtrC n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WK4_NITEU
membrane fusion protein MtrC
Possible membrane fusion protein MtrC {ECO:0000313|EMBL:CAD84581.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCN18_31_3_15_R3_B_scaffold_27_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12306..15422
DNA (3117bp) protein (1039aa)
Acriflavin resistance protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WK5_NITEU
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:CAD84580.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCN18_31_3_15_R3_B_scaffold_27_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15419..16846
DNA (1428bp) protein (476aa)
Outer membrane efflux protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WK6_NITEU
Outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:CAD84579.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCN18_31_3_15_R3_B_scaffold_27_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16861..17541
DNA (681bp) protein (227aa)
Possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820P9_NITEU
response regulator
Possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain {ECO:0000313|EMBL:CAD84578.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCN18_31_3_15_R3_B_scaffold_27_15
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17538..18884
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QR65_9CAUL
sensory transduction histidine kinase
SCN18_31_3_15_R3_B_scaffold_27_16
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18956..19738)
DNA (783bp) protein (261aa)
UPI0003CE31A2 related cluster n=1 Tax=unknown RepID=UPI0003CE31A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73196.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_17
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19870..20487
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6L2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74606.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_18
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20484..21629
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIZ3_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73197.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_19
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21619..22575
DNA (957bp) protein (319aa)
magnesium chelatase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893A9
magnesium chelatase
Magnesium chelatase {ECO:0000313|EMBL:AJP73198.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_20
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22572..23864
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73199.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_21
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23861..24880
DNA (1020bp) protein (340aa)
Putative membrane protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WIN2_9SPHN
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP73200.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_22
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24873..25757
DNA (885bp) protein (295aa)
UPI0003D63608 related cluster n=1 Tax=unknown RepID=UPI0003D63608
RDD domain-containing protein
RDD domain-containing protein {ECO:0000313|EMBL:AJP73201.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_23
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25754..26272)
DNA (519bp) protein (173aa)
Glyoxalase n=2 Tax=Pandoraea RepID=V5UAE9_9BURK
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AJF00409.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCN18_31_3_15_R3_B_scaffold_27_24
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26273..27730
DNA (1458bp) protein (486aa)
altronate hydrolase n=1 Tax=Sphingomonas elodea RepID=UPI00026302A3
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26235.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
altronate hydrolase
SCN18_31_3_15_R3_B_scaffold_27_25
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27845..28780
DNA (936bp) protein (312aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71995.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_26
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28894..29124
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000319EDB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71996.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_27
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29130..29654
DNA (525bp) protein (175aa)
acetyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI00026302A5
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AJP72667.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_28
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29732..30157
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00037DC6F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71997.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_27_29
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30154..30321)
DNA (168bp) protein (56aa)
SCN18_31_3_15_R3_B_scaffold_27_30
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30502..31446
DNA (945bp) protein (315aa)
2-nitropropane dioxygenase n=1 Tax=Sphingomonas elodea RepID=UPI00026302A6
2-nitropropane dioxygenase
2-nitropropane dioxygenase {ECO:0000313|EMBL:AJP71998.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying items 1-30 of 574 in total

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