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SCN18_31_3_15_R3_B_scaffold_121

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Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R3_B_scaffold_121_1
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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55..1467
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0003672BEE
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:ACB96244.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_31_3_15_R3_B_scaffold_121_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1617..2714
DNA (1098bp) protein (366aa)
Restriction endonuclease S subunit n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8L0G8_9SYNC
restriction endonuclease S subunits-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_31_3_15_R3_B_scaffold_121_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2711..5776
DNA (3066bp) protein (1022aa)
Putative type I restriction-modification enzyme subunit R {ECO:0000313|EMBL:AGI68224.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AGI68224.1};; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter antarcticus 307.;"
putative type I restriction-modification enzyme subunit R (EC:3.1.21.3)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000313F7CB
SCN18_31_3_15_R3_B_scaffold_121_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5766..6506
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJC9_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB96247.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_31_3_15_R3_B_scaffold_121_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6582..7130
DNA (549bp) protein (183aa)
Uncharacterized protein involved in cation transport n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSX8_MESAW
uncharacterized protein involved in cation transport
Uncharacterized protein involved in cation transport {ECO:0000313|EMBL:AGB48221.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_31_3_15_R3_B_scaffold_121_trna_1
unknown

Not on your lists

comp(7144..7230)
DNA (87bp)
transferRNA Ser
SCN18_31_3_15_R3_B_scaffold_121_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7543..8568
DNA (1026bp) protein (342aa)
lytic transglycosylase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000368BA9C
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AJP71620.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8552..9751
DNA (1200bp) protein (400aa)
rare lipoprotein A n=1 Tax=Sphingomonas elodea RepID=UPI000263083E
rare lipoprotein A
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_31_3_15_R3_B_scaffold_121_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..10935
DNA (1167bp) protein (389aa)
peptidase S11 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003069C85
peptidase S11
Peptidase S11 {ECO:0000313|EMBL:AJP71621.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11009..11986
DNA (978bp) protein (326aa)
DNA-directed DNA polymerase n=1 Tax=Sphingomonas elodea RepID=UPI000263083C
DNA polymerase
DNA polymerase {ECO:0000313|EMBL:AJP71622.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12040..12360
DNA (321bp) protein (107aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI000373657C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM56878.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCN18_31_3_15_R3_B_scaffold_121_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12439..13938
DNA (1500bp) protein (500aa)
methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000313|EMBL:AJP71623.1}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000313|EMBL:AJP71623.1};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
methionyl-tRNA synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D8950E
SCN18_31_3_15_R3_B_scaffold_121_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13935..14714
DNA (780bp) protein (260aa)
LuxR family transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030055BB
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AJP74337.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14711..15478
DNA (768bp) protein (256aa)
beta-lactamase n=1 Tax=Sphingomonas elodea RepID=UPI0002630839
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AJP71624.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15475..16119
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035FADDF
Uncharacterized protein {ECO:0000313|EMBL:GAM01672.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
peptidase
SCN18_31_3_15_R3_B_scaffold_121_15
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16127..17431)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM48 RepID=J3A7Q1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM61363.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
hypothetical protein
SCN18_31_3_15_R3_B_scaffold_121_16
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17434..19167)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM48 RepID=J3GDJ4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM61362.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
hypothetical protein
SCN18_31_3_15_R3_B_scaffold_121_17
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19585..20064
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00036BF0E8
Uncharacterized protein {ECO:0000313|EMBL:AHE53847.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
membrane-flanked domain-containing protein
SCN18_31_3_15_R3_B_scaffold_121_18
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20057..21499
DNA (1443bp) protein (481aa)
UPI0003D0434F related cluster n=1 Tax=unknown RepID=UPI0003D0434F
Uncharacterized protein {ECO:0000313|EMBL:AHE53848.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCN18_31_3_15_R3_B_scaffold_121_19
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21496..22914)
DNA (1419bp) protein (473aa)
cell wall hydrolase n=1 Tax=Sphingomonas elodea RepID=UPI00026308B2
SleB-like protein
SleB-like protein {ECO:0000313|EMBL:AJP74325.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_20
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23007..23312)
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71550.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_21
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23398..24318)
DNA (921bp) protein (307aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:AJP71551.1}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
cysteine synthase n=1 Tax=Sphingomonas elodea RepID=UPI00026308AF
cysteine synthase
SCN18_31_3_15_R3_B_scaffold_121_22
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24315..25646)
DNA (1332bp) protein (444aa)
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003105753
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJP71552.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_23
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25769..27160)
DNA (1392bp) protein (464aa)
MFS transporter n=1 Tax=Sphingomonas elodea RepID=UPI00026308AD
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJP71553.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_24
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27224..27865)
DNA (642bp) protein (214aa)
SCN18_31_3_15_R3_B_scaffold_121_25
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27996..28526)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D2F8DE
surface antigen
Surface antigen {ECO:0000313|EMBL:AJP71555.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_26
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28844..29182
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026308AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74326.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_121_27
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29201..30688)
DNA (1488bp) protein (496aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
beta-lactamase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037032F2
beta-lactamase
SCN18_31_3_15_R3_B_scaffold_121_28
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30879..32168
DNA (1290bp) protein (430aa)
SCN18_31_3_15_R3_B_scaffold_121_29
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32209..34536)
DNA (2328bp) protein (776aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
DNA helicase II n=1 Tax=Sphingomonas elodea RepID=UPI00026308A9
DNA helicase II
Displaying items 1-30 of 115 in total

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