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SCN18_31_3_15_R3_B_scaffold_137

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Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R3_B_scaffold_137_1
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
Transposase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KAL8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETX13410.1}; TaxID=1449350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax halodurans JCM 10272.;"
integrase catalytic subunit
SCN18_31_3_15_R3_B_scaffold_137_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..424)
DNA (279bp) protein (93aa)
Putative acyltransferase n=1 Tax=Pseudomonas sp. GM25 RepID=J2Q2V0_9PSED
Putative acyltransferase {ECO:0000313|EMBL:EJM30394.1}; Flags: Precursor;; TaxID=1144327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM25.;"
acyltransferase
SCN18_31_3_15_R3_B_scaffold_137_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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715..876
DNA (162bp) protein (54aa)
SCN18_31_3_15_R3_B_scaffold_137_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(905..1276)
DNA (372bp) protein (124aa)
Acyltransferase 3 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7N3_9RHIZ
Acyltransferase 3 {ECO:0000313|EMBL:CCV12475.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
acyltransferase 3
SCN18_31_3_15_R3_B_scaffold_137_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1376..2671)
DNA (1296bp) protein (432aa)
Sugar transferase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFT4_SPHWW
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ABQ71150.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_31_3_15_R3_B_scaffold_137_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3364..4047
DNA (684bp) protein (228aa)
SCN18_31_3_15_R3_B_scaffold_137_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4084..4881
DNA (798bp) protein (266aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N9X1_9GAMM
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EEF78466.1}; TaxID=637616 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans DMS010.;"
glycosyl transferase
SCN18_31_3_15_R3_B_scaffold_137_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5011..6306
DNA (1296bp) protein (432aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289A49B
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase {ECO:0000313|EMBL:AJP72589.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6319..7389)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TQ18_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD83836.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
peptidase M48 family protein
SCN18_31_3_15_R3_B_scaffold_137_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7828..8061
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B5A432
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72590.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8172..8945
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036A5C28
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AIT05338.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_31_3_15_R3_B_scaffold_137_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9033..9629)
DNA (597bp) protein (199aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
FKBP-type peptidylprolyl isomerase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AF5
FKBP-type peptidylprolyl isomerase
SCN18_31_3_15_R3_B_scaffold_137_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9723..9929)
DNA (207bp) protein (69aa)
30S ribosomal protein S21 n=1 Tax=Sphingomonas elodea RepID=UPI0002630AF6
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10076..10642)
DNA (567bp) protein (189aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74096.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_15
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10732..12018
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U733_9PROT
alpha-ketoglutarate permease
Alpha-ketoglutarate permease {ECO:0000313|EMBL:AJP72596.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_16
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12054..12938
DNA (885bp) protein (295aa)
transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035CCED1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJP72594.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_17
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12973..14205
DNA (1233bp) protein (411aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:AJP74515.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035DE580
histidine kinase
SCN18_31_3_15_R3_B_scaffold_137_18
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14294..15205
DNA (912bp) protein (304aa)
intradiol ring-cleavage dioxygenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037A1861
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:AJP72595.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_19
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15258..15647)
DNA (390bp) protein (130aa)
response regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D9C97D
response regulator
Response regulator {ECO:0000313|EMBL:AJP72597.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_20
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15722..18181)
DNA (2460bp) protein (820aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Sphingomonas elodea RepID=UPI00026313B3
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AJP74516.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_21
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18181..19482)
DNA (1302bp) protein (434aa)
signal peptide protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3CF
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AJP74517.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_22
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20052..21356
DNA (1305bp) protein (435aa)
UDP-glucose dehydrogenase {ECO:0000313|EMBL:ABP01356.2}; EC=1.1.1.22 {ECO:0000313|EMBL:ABP01356.2};; TaxID=179878 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas elodea.;"
UDP-glucose 6-dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037A7E04
UDP-glucose 6-dehydrogenase
SCN18_31_3_15_R3_B_scaffold_137_23
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21382..22206
DNA (825bp) protein (275aa)
nitrilase n=1 Tax=Sphingomonas elodea RepID=UPI0002632134
nitrilase
Nitrilase {ECO:0000313|EMBL:AJP72463.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_24
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22203..23576
DNA (1374bp) protein (458aa)
glutamate--cysteine ligase n=1 Tax=Sphingomonas elodea RepID=UPI0002632234
glutamate--cysteine ligase
Glutamate--cysteine ligase {ECO:0000313|EMBL:AJP73018.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_25
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23623..23862)
DNA (240bp) protein (80aa)
SCN18_31_3_15_R3_B_scaffold_137_26
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24062..24742
DNA (681bp) protein (227aa)
PAS domain S-box protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Y0_9BRAD
PAS domain S-box protein {ECO:0000313|EMBL:ERF80848.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative PAS/PAC sensor protein
SCN18_31_3_15_R3_B_scaffold_137_27
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24827..25720
DNA (894bp) protein (298aa)
ATPase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H8Z5_9SPHN
ATPase
ATPase {ECO:0000313|EMBL:AJP72441.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_28
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25710..26591
DNA (882bp) protein (294aa)
UPI0003D63661 related cluster n=1 Tax=unknown RepID=UPI0003D63661
N-acetylmuramic acid-6-phosphate etherase
N-acetylmuramic acid-6-phosphate etherase {ECO:0000313|EMBL:AJP72435.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R3_B_scaffold_137_29
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26588..27715
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000380F2B1
SCN18_31_3_15_R3_B_scaffold_137_30
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27724..28809)
DNA (1086bp) protein (362aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DF89
Displaying items 1-30 of 121 in total

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