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SCN18_31_3_15_R4_B_scaffold_5001

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_5001_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3..380
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64644.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R4_B_scaffold_5001_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(502..2115)
DNA (1614bp) protein (538aa)
glutamate synthase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00036E2298
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:CEJ13844.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_5001_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2209..2397)
DNA (189bp) protein (63aa)
RND-family efflux transporter n=2 Tax=Sphingobium RepID=D4Z8P4_SPHJU
RND-family efflux transporter
RND-family efflux transporter {ECO:0000313|EMBL:BAI98976.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_31_3_15_R4_B_scaffold_5001_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2555..3439)
DNA (885bp) protein (295aa)
RNA polymerase sigma 70 n=2 Tax=Saccharopolyspora erythraea RepID=T2S5P7_SACER
RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CAM01245.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
SCN18_31_3_15_R4_B_scaffold_5001_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3513..3968
DNA (456bp) protein (152aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AKU4_9ACTO
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_5001_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4066..4686
DNA (621bp) protein (207aa)
2'-5' RNA ligase n=1 Tax=Polaromonas sp. CF318 RepID=J2U6N1_9BURK
2'-5' RNA ligase {ECO:0000313|EMBL:EJL86837.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
2',5' RNA ligase
SCN18_31_3_15_R4_B_scaffold_5001_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4646..5005
DNA (360bp) protein (120aa)
ArsC family transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003488624
Glutathione-dependent thiol reductase {ECO:0000313|EMBL:GAM99017.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
Displaying 7 items

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